RNA–Protein interactions for RNA: ENST00000561347.1

WDR61-216, Transcript of WD repeat domain 61, humanhuman

TSL 1 (best)

Gene WDR61, Length 1,131 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR61-216ENST00000561347 NISCHQ9Y2I1 1504 aa50.71■■■■■ 5.71
WDR61-216ENST00000561347 ABCC9O60706 1549 aa45.76■■■■■ 4.92
WDR61-216ENST00000561347 CCDC180Q9P1Z9 1646 aa45.58■■■■■ 4.89
WDR61-216ENST00000561347 RB1CC1Q8TDY2 1594 aa43.43■■■■■ 4.54
WDR61-216ENST00000561347 DNAJC5BQ9UF47 199 aa43.1■■■■■ 4.49
WDR61-216ENST00000561347 NACADO15069 1562 aa43.09■■■■■ 4.49
WDR61-216ENST00000561347 DCAF8L2P0C7V8 631 aa42.77■■■■■ 4.44
WDR61-216ENST00000561347 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
WDR61-216ENST00000561347 UNC13AQ9UPW8 1703 aa42.55■■■■■ 4.4
WDR61-216ENST00000561347 MYO15BQ96JP2 1530 aa42.44■■■■■ 4.38
WDR61-216ENST00000561347 BICRAQ9NZM4 1560 aa42.27■■■■■ 4.36
WDR61-216ENST00000561347 ZCCHC6Q5VYS8 1495 aaKnown RBP42.02■■■■■ 4.32
WDR61-216ENST00000561347 DCAF1Q9Y4B6 1507 aa41.85■■■■■ 4.29
WDR61-216ENST00000561347 SHROOM4Q9ULL8 1493 aa41.59■■■■■ 4.25
WDR61-216ENST00000561347 SCRIBQ14160 1630 aa41.56■■■■■ 4.24
WDR61-216ENST00000561347 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
WDR61-216ENST00000561347 CECR2Q9BXF3 1484 aa41.22■■■■■ 4.19
WDR61-216ENST00000561347 EIF4G1Q04637 1599 aaKnown RBP41.2■■■■■ 4.19
WDR61-216ENST00000561347 NCAPD3P42695 1498 aa39.79■■■■□ 3.96
WDR61-216ENST00000561347 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
WDR61-216ENST00000561347 SMARCA4P51532 1647 aa39.62■■■■□ 3.93
WDR61-216ENST00000561347 DNAJC5Q9H3Z4 198 aa39.61■■■■□ 3.93
WDR61-216ENST00000561347 SMARCA2P51531 1590 aa39.52■■■■□ 3.92
WDR61-216ENST00000561347 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
WDR61-216ENST00000561347 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
WDR61-216ENST00000561347 CUX2O14529 1486 aa39.47■■■■□ 3.91
WDR61-216ENST00000561347 BAZ1AQ9NRL2 1556 aaPredicted RBP39.34■■■■□ 3.89
WDR61-216ENST00000561347 NESP48681 1621 aa39.29■■■■□ 3.88
WDR61-216ENST00000561347 BAZ1BQ9UIG0 1483 aaKnown RBP39.26■■■■□ 3.88
WDR61-216ENST00000561347 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
WDR61-216ENST00000561347 MROH2BQ7Z745 1585 aa39.1■■■■□ 3.85
WDR61-216ENST00000561347 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
WDR61-216ENST00000561347 LAMC3Q9Y6N6 1575 aa38.92■■■■□ 3.82
WDR61-216ENST00000561347 KIF21AQ7Z4S6 1674 aa38.79■■■■□ 3.8
WDR61-216ENST00000561347 PDS5BQ9NTI5 1447 aa38.67■■■■□ 3.78
WDR61-216ENST00000561347 WIZO95785 1651 aa38.63■■■■□ 3.77
WDR61-216ENST00000561347 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.76
WDR61-216ENST00000561347 MRC2Q9UBG0 1479 aa38.41■■■■□ 3.74
WDR61-216ENST00000561347 WDR62O43379 1518 aa38.34■■■■□ 3.73
WDR61-216ENST00000561347 CEP164Q9UPV0 1460 aa38.21■■■■□ 3.71
WDR61-216ENST00000561347 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
WDR61-216ENST00000561347 FANCD2Q9BXW9 1451 aa38.15■■■■□ 3.7
WDR61-216ENST00000561347 CFTRP13569 1480 aa38.11■■■■□ 3.69
WDR61-216ENST00000561347 TOP2AP11388 1531 aaKnown RBP38.11■■■■□ 3.69
WDR61-216ENST00000561347 URB2Q14146 1524 aaKnown RBP37.9■■■■□ 3.66
WDR61-216ENST00000561347 TRIM41Q8WV44 630 aa37.83■■■■□ 3.65
WDR61-216ENST00000561347 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
WDR61-216ENST00000561347 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
WDR61-216ENST00000561347 OSCARQ8IYS5 282 aa37.56■■■■□ 3.6
WDR61-216ENST00000561347 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
WDR61-216ENST00000561347 IFT140Q96RY7 1462 aa37.44■■■■□ 3.58
WDR61-216ENST00000561347 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
WDR61-216ENST00000561347 DNMBPQ6XZF7 1577 aa37.28■■■■□ 3.56
WDR61-216ENST00000561347 EIF4G3O43432 1585 aaKnown RBP37.25■■■■□ 3.55
WDR61-216ENST00000561347 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
WDR61-216ENST00000561347 RIMBP3CA6NJZ7 1639 aa37.23■■■■□ 3.55
WDR61-216ENST00000561347 RIMBP3BA6NNM3 1639 aa37.23■■■■□ 3.55
WDR61-216ENST00000561347 RIMBP3Q9UFD9 1639 aa37.23■■■■□ 3.55
WDR61-216ENST00000561347 TARBP1Q13395 1621 aaKnown RBP37.14■■■■□ 3.54
WDR61-216ENST00000561347 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
WDR61-216ENST00000561347 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.52
WDR61-216ENST00000561347 POLA1P09884 1462 aaPredicted RBP37.05■■■■□ 3.52
WDR61-216ENST00000561347 CHD1O14646 1710 aa37■■■■□ 3.51
WDR61-216ENST00000561347 RAD54L2Q9Y4B4 1467 aa36.93■■■■□ 3.5
WDR61-216ENST00000561347 SOGA1O94964 1423 aa36.82■■■■□ 3.48
WDR61-216ENST00000561347 TDRD9Q8NDG6 1382 aaKnown RBP36.79■■■■□ 3.48
WDR61-216ENST00000561347 FGD5Q6ZNL6 1462 aa36.79■■■■□ 3.48
WDR61-216ENST00000561347 FBLN2P98095 1184 aa36.78■■■■□ 3.48
WDR61-216ENST00000561347 CUX1P39880 1505 aa36.75■■■■□ 3.47
WDR61-216ENST00000561347 CYB5RLQ6IPT4 315 aa36.74■■■■□ 3.47
WDR61-216ENST00000561347 ARAP1Q96P48 1450 aa36.73■■■■□ 3.47
WDR61-216ENST00000561347 SNAPC4Q5SXM2 1469 aa36.7■■■■□ 3.47
WDR61-216ENST00000561347 WDR97A6NE52 1622 aa36.68■■■■□ 3.46
WDR61-216ENST00000561347 CLASP1Q7Z460 1538 aa36.58■■■■□ 3.45
WDR61-216ENST00000561347 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
WDR61-216ENST00000561347 GRIN2BQ13224 1484 aa36.53■■■■□ 3.44
WDR61-216ENST00000561347 SYNJ1O43426 1573 aa36.48■■■■□ 3.43
WDR61-216ENST00000561347 CHMP7Q8WUX9 453 aaPredicted RBP36.47■■■■□ 3.43
WDR61-216ENST00000561347 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
WDR61-216ENST00000561347 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
WDR61-216ENST00000561347 GAPVD1Q14C86 1478 aa36.38■■■■□ 3.41
WDR61-216ENST00000561347 ABCA5Q8WWZ7 1642 aa36.35■■■■□ 3.41
WDR61-216ENST00000561347 TRHP20396 242 aaPredicted RBP36.35■■■■□ 3.41
WDR61-216ENST00000561347 ABCA10Q8WWZ4 1543 aa36.34■■■■□ 3.41
WDR61-216ENST00000561347 SUPT5HO00267 1087 aaKnown RBP36.32■■■■□ 3.4
WDR61-216ENST00000561347 WRNQ14191 1432 aaPredicted RBP eCLIP36.11■■■■□ 3.37
WDR61-216ENST00000561347 BIVM-ERCC5R4GMW8 1640 aa36.11■■■■□ 3.37
WDR61-216ENST00000561347 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
WDR61-216ENST00000561347 GRIN2AQ12879 1464 aa36.09■■■■□ 3.37
WDR61-216ENST00000561347 TOP2BQ02880 1626 aa36.08■■■■□ 3.37
WDR61-216ENST00000561347 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
WDR61-216ENST00000561347 CEP170Q5SW79 1584 aa36.01■■■■□ 3.35
WDR61-216ENST00000561347 NUP160Q12769 1436 aa35.98■■■■□ 3.35
WDR61-216ENST00000561347 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
WDR61-216ENST00000561347 ERICH3Q5RHP9 1530 aa35.87■■■■□ 3.33
WDR61-216ENST00000561347 SHROOM2Q13796 1616 aa35.86■■■■□ 3.33
WDR61-216ENST00000561347 PRG4Q92954 1404 aaPredicted RBP35.62■■■■□ 3.29
WDR61-216ENST00000561347 RUSC2Q8N2Y8 1516 aa35.59■■■■□ 3.29
WDR61-216ENST00000561347 JPH4Q96JJ6 628 aa35.54■■■■□ 3.28
WDR61-216ENST00000561347 KIF13AQ9H1H9 1805 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms