RNA–Protein interactions for RNA: ENST00000561338.5

ALDH1A3-207, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-207ENST00000561338 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
ALDH1A3-207ENST00000561338 CCDC180Q9P1Z9 1646 aa37.29■■■■□ 3.56
ALDH1A3-207ENST00000561338 ABCC9O60706 1549 aa36.48■■■■□ 3.43
ALDH1A3-207ENST00000561338 RB1CC1Q8TDY2 1594 aa35.02■■■■□ 3.2
ALDH1A3-207ENST00000561338 NACADO15069 1562 aa34.91■■■■□ 3.18
ALDH1A3-207ENST00000561338 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
ALDH1A3-207ENST00000561338 UNC13AQ9UPW8 1703 aa34.66■■■■□ 3.14
ALDH1A3-207ENST00000561338 MYO15BQ96JP2 1530 aa34.61■■■■□ 3.13
ALDH1A3-207ENST00000561338 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
ALDH1A3-207ENST00000561338 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
ALDH1A3-207ENST00000561338 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
ALDH1A3-207ENST00000561338 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
ALDH1A3-207ENST00000561338 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
ALDH1A3-207ENST00000561338 DNAJC5BQ9UF47 199 aa33.63■■■□□ 2.97
ALDH1A3-207ENST00000561338 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
ALDH1A3-207ENST00000561338 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
ALDH1A3-207ENST00000561338 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
ALDH1A3-207ENST00000561338 CECR2Q9BXF3 1484 aa32.75■■■□□ 2.83
ALDH1A3-207ENST00000561338 SMARCA4P51532 1647 aa32.45■■■□□ 2.79
ALDH1A3-207ENST00000561338 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
ALDH1A3-207ENST00000561338 ATAD2BQ9ULI0 1458 aa32.17■■■□□ 2.74
ALDH1A3-207ENST00000561338 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
ALDH1A3-207ENST00000561338 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
ALDH1A3-207ENST00000561338 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
ALDH1A3-207ENST00000561338 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
ALDH1A3-207ENST00000561338 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
ALDH1A3-207ENST00000561338 BAZ1BQ9UIG0 1483 aaKnown RBP31.87■■■□□ 2.69
ALDH1A3-207ENST00000561338 WIZO95785 1651 aa31.86■■■□□ 2.69
ALDH1A3-207ENST00000561338 NESP48681 1621 aa31.58■■■□□ 2.65
ALDH1A3-207ENST00000561338 RSF1Q96T23 1441 aaPredicted RBP31.54■■■□□ 2.64
ALDH1A3-207ENST00000561338 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
ALDH1A3-207ENST00000561338 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
ALDH1A3-207ENST00000561338 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
ALDH1A3-207ENST00000561338 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
ALDH1A3-207ENST00000561338 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
ALDH1A3-207ENST00000561338 CUX2O14529 1486 aa31.17■■■□□ 2.58
ALDH1A3-207ENST00000561338 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
ALDH1A3-207ENST00000561338 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
ALDH1A3-207ENST00000561338 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
ALDH1A3-207ENST00000561338 CFTRP13569 1480 aa30.98■■■□□ 2.55
ALDH1A3-207ENST00000561338 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
ALDH1A3-207ENST00000561338 WDR62O43379 1518 aa30.88■■■□□ 2.53
ALDH1A3-207ENST00000561338 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
ALDH1A3-207ENST00000561338 FANCD2Q9BXW9 1451 aa30.86■■■□□ 2.53
ALDH1A3-207ENST00000561338 CEP164Q9UPV0 1460 aa30.85■■■□□ 2.53
ALDH1A3-207ENST00000561338 URB2Q14146 1524 aaKnown RBP30.68■■■□□ 2.5
ALDH1A3-207ENST00000561338 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
ALDH1A3-207ENST00000561338 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
ALDH1A3-207ENST00000561338 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
ALDH1A3-207ENST00000561338 DNAJC5Q9H3Z4 198 aa30.31■■■□□ 2.44
ALDH1A3-207ENST00000561338 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
ALDH1A3-207ENST00000561338 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
ALDH1A3-207ENST00000561338 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
ALDH1A3-207ENST00000561338 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
ALDH1A3-207ENST00000561338 IFT140Q96RY7 1462 aa30.17■■■□□ 2.42
ALDH1A3-207ENST00000561338 CUX1P39880 1505 aa30.16■■■□□ 2.42
ALDH1A3-207ENST00000561338 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
ALDH1A3-207ENST00000561338 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
ALDH1A3-207ENST00000561338 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
ALDH1A3-207ENST00000561338 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
ALDH1A3-207ENST00000561338 CHD1O14646 1710 aa29.95■■■□□ 2.38
ALDH1A3-207ENST00000561338 BIVM-ERCC5R4GMW8 1640 aa29.94■■■□□ 2.38
ALDH1A3-207ENST00000561338 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
ALDH1A3-207ENST00000561338 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.37
ALDH1A3-207ENST00000561338 PBRM1Q86U86 1689 aa29.85■■■□□ 2.37
ALDH1A3-207ENST00000561338 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
ALDH1A3-207ENST00000561338 SOGA1O94964 1423 aa29.83■■■□□ 2.37
ALDH1A3-207ENST00000561338 ABCA5Q8WWZ7 1642 aa29.78■■■□□ 2.36
ALDH1A3-207ENST00000561338 TDRD9Q8NDG6 1382 aaKnown RBP29.71■■■□□ 2.35
ALDH1A3-207ENST00000561338 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
ALDH1A3-207ENST00000561338 WRNQ14191 1432 aaPredicted RBP eCLIP29.7■■■□□ 2.34
ALDH1A3-207ENST00000561338 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
ALDH1A3-207ENST00000561338 RIMBP3CA6NJZ7 1639 aa29.58■■■□□ 2.33
ALDH1A3-207ENST00000561338 RIMBP3BA6NNM3 1639 aa29.58■■■□□ 2.33
ALDH1A3-207ENST00000561338 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
ALDH1A3-207ENST00000561338 RIMBP3Q9UFD9 1639 aa29.58■■■□□ 2.33
ALDH1A3-207ENST00000561338 OSCARQ8IYS5 282 aa29.57■■■□□ 2.32
ALDH1A3-207ENST00000561338 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
ALDH1A3-207ENST00000561338 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
ALDH1A3-207ENST00000561338 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
ALDH1A3-207ENST00000561338 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
ALDH1A3-207ENST00000561338 SYNJ2O15056 1496 aa29.44■■■□□ 2.3
ALDH1A3-207ENST00000561338 ARHGEF11O15085 1522 aa29.44■■■□□ 2.3
ALDH1A3-207ENST00000561338 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
ALDH1A3-207ENST00000561338 FBLN2P98095 1184 aa29.32■■■□□ 2.28
ALDH1A3-207ENST00000561338 CEP170Q5SW79 1584 aa29.28■■■□□ 2.28
ALDH1A3-207ENST00000561338 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
ALDH1A3-207ENST00000561338 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
ALDH1A3-207ENST00000561338 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
ALDH1A3-207ENST00000561338 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
ALDH1A3-207ENST00000561338 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
ALDH1A3-207ENST00000561338 NUP160Q12769 1436 aa29.14■■■□□ 2.26
ALDH1A3-207ENST00000561338 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
ALDH1A3-207ENST00000561338 CUL7Q14999 1698 aa29.14■■■□□ 2.26
ALDH1A3-207ENST00000561338 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
ALDH1A3-207ENST00000561338 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
ALDH1A3-207ENST00000561338 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
ALDH1A3-207ENST00000561338 IGF1RP08069 1367 aa28.94■■■□□ 2.22
ALDH1A3-207ENST00000561338 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
ALDH1A3-207ENST00000561338 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms