RNA–Protein interactions for RNA: ENST00000561332.1

CCDC33-210, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 820 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-210ENST00000561332 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
CCDC33-210ENST00000561332 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
CCDC33-210ENST00000561332 ABCC9O60706 1549 aa28.88■■■□□ 2.21
CCDC33-210ENST00000561332 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
CCDC33-210ENST00000561332 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
CCDC33-210ENST00000561332 NACADO15069 1562 aa27.67■■■□□ 2.02
CCDC33-210ENST00000561332 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
CCDC33-210ENST00000561332 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
CCDC33-210ENST00000561332 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
CCDC33-210ENST00000561332 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
CCDC33-210ENST00000561332 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
CCDC33-210ENST00000561332 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
CCDC33-210ENST00000561332 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
CCDC33-210ENST00000561332 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.85
CCDC33-210ENST00000561332 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
CCDC33-210ENST00000561332 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
CCDC33-210ENST00000561332 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
CCDC33-210ENST00000561332 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
CCDC33-210ENST00000561332 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
CCDC33-210ENST00000561332 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
CCDC33-210ENST00000561332 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
CCDC33-210ENST00000561332 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
CCDC33-210ENST00000561332 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
CCDC33-210ENST00000561332 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
CCDC33-210ENST00000561332 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
CCDC33-210ENST00000561332 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
CCDC33-210ENST00000561332 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
CCDC33-210ENST00000561332 WIZO95785 1651 aa25.21■■□□□ 1.63
CCDC33-210ENST00000561332 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
CCDC33-210ENST00000561332 NESP48681 1621 aa24.96■■□□□ 1.59
CCDC33-210ENST00000561332 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
CCDC33-210ENST00000561332 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
CCDC33-210ENST00000561332 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
CCDC33-210ENST00000561332 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
CCDC33-210ENST00000561332 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
CCDC33-210ENST00000561332 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
CCDC33-210ENST00000561332 KIF21AQ7Z4S6 1674 aa24.67■■□□□ 1.54
CCDC33-210ENST00000561332 CUX2O14529 1486 aa24.64■■□□□ 1.53
CCDC33-210ENST00000561332 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
CCDC33-210ENST00000561332 CFTRP13569 1480 aa24.62■■□□□ 1.53
CCDC33-210ENST00000561332 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
CCDC33-210ENST00000561332 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
CCDC33-210ENST00000561332 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
CCDC33-210ENST00000561332 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
CCDC33-210ENST00000561332 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
CCDC33-210ENST00000561332 MRC2Q9UBG0 1479 aa24.48■■□□□ 1.51
CCDC33-210ENST00000561332 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
CCDC33-210ENST00000561332 WDR62O43379 1518 aa24.39■■□□□ 1.49
CCDC33-210ENST00000561332 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
CCDC33-210ENST00000561332 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
CCDC33-210ENST00000561332 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
CCDC33-210ENST00000561332 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
CCDC33-210ENST00000561332 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
CCDC33-210ENST00000561332 DNAJC5Q9H3Z4 198 aa23.94■■□□□ 1.42
CCDC33-210ENST00000561332 CUX1P39880 1505 aa23.91■■□□□ 1.42
CCDC33-210ENST00000561332 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
CCDC33-210ENST00000561332 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
CCDC33-210ENST00000561332 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
CCDC33-210ENST00000561332 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
CCDC33-210ENST00000561332 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
CCDC33-210ENST00000561332 SOGA1O94964 1423 aa23.81■■□□□ 1.4
CCDC33-210ENST00000561332 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
CCDC33-210ENST00000561332 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
CCDC33-210ENST00000561332 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.39
CCDC33-210ENST00000561332 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
CCDC33-210ENST00000561332 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
CCDC33-210ENST00000561332 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
CCDC33-210ENST00000561332 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
CCDC33-210ENST00000561332 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
CCDC33-210ENST00000561332 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
CCDC33-210ENST00000561332 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
CCDC33-210ENST00000561332 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
CCDC33-210ENST00000561332 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
CCDC33-210ENST00000561332 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
CCDC33-210ENST00000561332 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
CCDC33-210ENST00000561332 CHD1O14646 1710 aa23.51■■□□□ 1.35
CCDC33-210ENST00000561332 FBLN2P98095 1184 aa23.51■■□□□ 1.35
CCDC33-210ENST00000561332 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
CCDC33-210ENST00000561332 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
CCDC33-210ENST00000561332 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
CCDC33-210ENST00000561332 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
CCDC33-210ENST00000561332 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
CCDC33-210ENST00000561332 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
CCDC33-210ENST00000561332 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
CCDC33-210ENST00000561332 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
CCDC33-210ENST00000561332 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
CCDC33-210ENST00000561332 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
CCDC33-210ENST00000561332 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
CCDC33-210ENST00000561332 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
CCDC33-210ENST00000561332 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
CCDC33-210ENST00000561332 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
CCDC33-210ENST00000561332 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
CCDC33-210ENST00000561332 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
CCDC33-210ENST00000561332 IGF1RP08069 1367 aa23.13■■□□□ 1.29
CCDC33-210ENST00000561332 NUP160Q12769 1436 aa23.12■■□□□ 1.29
CCDC33-210ENST00000561332 CUL7Q14999 1698 aa23.11■■□□□ 1.29
CCDC33-210ENST00000561332 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
CCDC33-210ENST00000561332 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
CCDC33-210ENST00000561332 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
CCDC33-210ENST00000561332 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms