RNA–Protein interactions for RNA: ENST00000561309.1

IGDCC4-206, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 3

Gene IGDCC4, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-206ENST00000561309 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
IGDCC4-206ENST00000561309 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
IGDCC4-206ENST00000561309 ABCC9O60706 1549 aa38.11■■■■□ 3.69
IGDCC4-206ENST00000561309 RB1CC1Q8TDY2 1594 aa36.41■■■■□ 3.42
IGDCC4-206ENST00000561309 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
IGDCC4-206ENST00000561309 NACADO15069 1562 aa36.19■■■■□ 3.38
IGDCC4-206ENST00000561309 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
IGDCC4-206ENST00000561309 UNC13AQ9UPW8 1703 aa35.69■■■■□ 3.3
IGDCC4-206ENST00000561309 ZCCHC6Q5VYS8 1495 aaKnown RBP35.58■■■■□ 3.29
IGDCC4-206ENST00000561309 PABPN1Q86U42 306 aaKnown RBP eCLIP35.51■■■■□ 3.28
IGDCC4-206ENST00000561309 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
IGDCC4-206ENST00000561309 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
IGDCC4-206ENST00000561309 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
IGDCC4-206ENST00000561309 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
IGDCC4-206ENST00000561309 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
IGDCC4-206ENST00000561309 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
IGDCC4-206ENST00000561309 EIF4G1Q04637 1599 aaKnown RBP34.42■■■■□ 3.1
IGDCC4-206ENST00000561309 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
IGDCC4-206ENST00000561309 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
IGDCC4-206ENST00000561309 NCAPD3P42695 1498 aa33.34■■■□□ 2.93
IGDCC4-206ENST00000561309 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
IGDCC4-206ENST00000561309 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
IGDCC4-206ENST00000561309 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
IGDCC4-206ENST00000561309 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
IGDCC4-206ENST00000561309 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
IGDCC4-206ENST00000561309 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
IGDCC4-206ENST00000561309 PEG3Q9GZU2 1588 aa33.02■■■□□ 2.88
IGDCC4-206ENST00000561309 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
IGDCC4-206ENST00000561309 NESP48681 1621 aa32.8■■■□□ 2.84
IGDCC4-206ENST00000561309 WIZO95785 1651 aa32.75■■■□□ 2.83
IGDCC4-206ENST00000561309 CUX2O14529 1486 aa32.67■■■□□ 2.82
IGDCC4-206ENST00000561309 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
IGDCC4-206ENST00000561309 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
IGDCC4-206ENST00000561309 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
IGDCC4-206ENST00000561309 THOC2Q8NI27 1593 aaKnown RBP32.42■■■□□ 2.78
IGDCC4-206ENST00000561309 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
IGDCC4-206ENST00000561309 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
IGDCC4-206ENST00000561309 TOP2AP11388 1531 aaKnown RBP32.3■■■□□ 2.76
IGDCC4-206ENST00000561309 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
IGDCC4-206ENST00000561309 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
IGDCC4-206ENST00000561309 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
IGDCC4-206ENST00000561309 CFTRP13569 1480 aa32.05■■■□□ 2.72
IGDCC4-206ENST00000561309 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
IGDCC4-206ENST00000561309 WDR62O43379 1518 aa32.02■■■□□ 2.72
IGDCC4-206ENST00000561309 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
IGDCC4-206ENST00000561309 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
IGDCC4-206ENST00000561309 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
IGDCC4-206ENST00000561309 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
IGDCC4-206ENST00000561309 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
IGDCC4-206ENST00000561309 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
IGDCC4-206ENST00000561309 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
IGDCC4-206ENST00000561309 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
IGDCC4-206ENST00000561309 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
IGDCC4-206ENST00000561309 OSCARQ8IYS5 282 aa31.26■■■□□ 2.59
IGDCC4-206ENST00000561309 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
IGDCC4-206ENST00000561309 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
IGDCC4-206ENST00000561309 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
IGDCC4-206ENST00000561309 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
IGDCC4-206ENST00000561309 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
IGDCC4-206ENST00000561309 RAD54L2Q9Y4B4 1467 aa31.06■■■□□ 2.56
IGDCC4-206ENST00000561309 SOGA1O94964 1423 aa31.04■■■□□ 2.56
IGDCC4-206ENST00000561309 CUX1P39880 1505 aa31.03■■■□□ 2.56
IGDCC4-206ENST00000561309 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
IGDCC4-206ENST00000561309 CHD1O14646 1710 aa31.01■■■□□ 2.55
IGDCC4-206ENST00000561309 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
IGDCC4-206ENST00000561309 FBLN2P98095 1184 aa30.91■■■□□ 2.54
IGDCC4-206ENST00000561309 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
IGDCC4-206ENST00000561309 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
IGDCC4-206ENST00000561309 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
IGDCC4-206ENST00000561309 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
IGDCC4-206ENST00000561309 SNAPC4Q5SXM2 1469 aa30.79■■■□□ 2.52
IGDCC4-206ENST00000561309 PBRM1Q86U86 1689 aa30.77■■■□□ 2.52
IGDCC4-206ENST00000561309 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
IGDCC4-206ENST00000561309 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
IGDCC4-206ENST00000561309 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
IGDCC4-206ENST00000561309 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
IGDCC4-206ENST00000561309 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
IGDCC4-206ENST00000561309 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
IGDCC4-206ENST00000561309 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
IGDCC4-206ENST00000561309 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
IGDCC4-206ENST00000561309 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
IGDCC4-206ENST00000561309 ABCA5Q8WWZ7 1642 aa30.63■■■□□ 2.49
IGDCC4-206ENST00000561309 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
IGDCC4-206ENST00000561309 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
IGDCC4-206ENST00000561309 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
IGDCC4-206ENST00000561309 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
IGDCC4-206ENST00000561309 ARAP1Q96P48 1450 aa30.45■■■□□ 2.47
IGDCC4-206ENST00000561309 ADAMTS12P58397 1594 aa30.39■■■□□ 2.46
IGDCC4-206ENST00000561309 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
IGDCC4-206ENST00000561309 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
IGDCC4-206ENST00000561309 FHAD1B1AJZ9 1412 aa30.28■■■□□ 2.44
IGDCC4-206ENST00000561309 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
IGDCC4-206ENST00000561309 NUP160Q12769 1436 aa30.17■■■□□ 2.42
IGDCC4-206ENST00000561309 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
IGDCC4-206ENST00000561309 ERCC6L2Q5T890 1561 aa30.09■■■□□ 2.41
IGDCC4-206ENST00000561309 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
IGDCC4-206ENST00000561309 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
IGDCC4-206ENST00000561309 CUL7Q14999 1698 aa30■■■□□ 2.39
IGDCC4-206ENST00000561309 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
IGDCC4-206ENST00000561309 IGF1RP08069 1367 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms