RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
CRTC3-214ENST00000561290 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
CRTC3-214ENST00000561290 ABCC9O60706 1549 aa31.9■■■□□ 2.7
CRTC3-214ENST00000561290 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
CRTC3-214ENST00000561290 NACADO15069 1562 aa30.45■■■□□ 2.47
CRTC3-214ENST00000561290 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
CRTC3-214ENST00000561290 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
CRTC3-214ENST00000561290 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
CRTC3-214ENST00000561290 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
CRTC3-214ENST00000561290 DCAF1Q9Y4B6 1507 aa29.87■■■□□ 2.37
CRTC3-214ENST00000561290 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
CRTC3-214ENST00000561290 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
CRTC3-214ENST00000561290 DNAJC5BQ9UF47 199 aa29.65■■■□□ 2.34
CRTC3-214ENST00000561290 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
CRTC3-214ENST00000561290 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
CRTC3-214ENST00000561290 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
CRTC3-214ENST00000561290 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
CRTC3-214ENST00000561290 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
CRTC3-214ENST00000561290 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
CRTC3-214ENST00000561290 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
CRTC3-214ENST00000561290 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
CRTC3-214ENST00000561290 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
CRTC3-214ENST00000561290 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
CRTC3-214ENST00000561290 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
CRTC3-214ENST00000561290 PEG3Q9GZU2 1588 aa27.86■■■□□ 2.05
CRTC3-214ENST00000561290 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
CRTC3-214ENST00000561290 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
CRTC3-214ENST00000561290 ERCC6Q03468 1493 aa27.56■■■□□ 2
CRTC3-214ENST00000561290 CUX2O14529 1486 aa27.52■■■□□ 2
CRTC3-214ENST00000561290 NESP48681 1621 aa27.47■■□□□ 1.99
CRTC3-214ENST00000561290 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
CRTC3-214ENST00000561290 WIZO95785 1651 aa27.39■■□□□ 1.97
CRTC3-214ENST00000561290 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
CRTC3-214ENST00000561290 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
CRTC3-214ENST00000561290 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
CRTC3-214ENST00000561290 CADPSQ9ULU8 1353 aa27.21■■□□□ 1.95
CRTC3-214ENST00000561290 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
CRTC3-214ENST00000561290 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
CRTC3-214ENST00000561290 DNAJC5Q9H3Z4 198 aa27.12■■□□□ 1.93
CRTC3-214ENST00000561290 CFTRP13569 1480 aa26.99■■□□□ 1.91
CRTC3-214ENST00000561290 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
CRTC3-214ENST00000561290 WDR62O43379 1518 aa26.95■■□□□ 1.9
CRTC3-214ENST00000561290 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
CRTC3-214ENST00000561290 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
CRTC3-214ENST00000561290 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
CRTC3-214ENST00000561290 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
CRTC3-214ENST00000561290 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
CRTC3-214ENST00000561290 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
CRTC3-214ENST00000561290 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
CRTC3-214ENST00000561290 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
CRTC3-214ENST00000561290 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
CRTC3-214ENST00000561290 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
CRTC3-214ENST00000561290 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
CRTC3-214ENST00000561290 EIF4G3O43432 1585 aaKnown RBP26.19■■□□□ 1.78
CRTC3-214ENST00000561290 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
CRTC3-214ENST00000561290 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
CRTC3-214ENST00000561290 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
CRTC3-214ENST00000561290 CUX1P39880 1505 aa26.04■■□□□ 1.76
CRTC3-214ENST00000561290 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
CRTC3-214ENST00000561290 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.76
CRTC3-214ENST00000561290 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
CRTC3-214ENST00000561290 SOGA1O94964 1423 aa26■■□□□ 1.75
CRTC3-214ENST00000561290 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
CRTC3-214ENST00000561290 CHD1O14646 1710 aa25.93■■□□□ 1.74
CRTC3-214ENST00000561290 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
CRTC3-214ENST00000561290 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
CRTC3-214ENST00000561290 RIMBP3CA6NJZ7 1639 aa25.88■■□□□ 1.73
CRTC3-214ENST00000561290 RIMBP3BA6NNM3 1639 aa25.88■■□□□ 1.73
CRTC3-214ENST00000561290 RIMBP3Q9UFD9 1639 aa25.88■■□□□ 1.73
CRTC3-214ENST00000561290 MAGI1Q96QZ7 1491 aaPredicted RBP25.83■■□□□ 1.73
CRTC3-214ENST00000561290 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
CRTC3-214ENST00000561290 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
CRTC3-214ENST00000561290 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
CRTC3-214ENST00000561290 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
CRTC3-214ENST00000561290 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
CRTC3-214ENST00000561290 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
CRTC3-214ENST00000561290 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
CRTC3-214ENST00000561290 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
CRTC3-214ENST00000561290 GAPVD1Q14C86 1478 aa25.73■■□□□ 1.71
CRTC3-214ENST00000561290 FBLN2P98095 1184 aa25.72■■□□□ 1.71
CRTC3-214ENST00000561290 SYNJ2O15056 1496 aa25.71■■□□□ 1.71
CRTC3-214ENST00000561290 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
CRTC3-214ENST00000561290 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
CRTC3-214ENST00000561290 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
CRTC3-214ENST00000561290 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
CRTC3-214ENST00000561290 ARAP1Q96P48 1450 aa25.59■■□□□ 1.69
CRTC3-214ENST00000561290 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
CRTC3-214ENST00000561290 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
CRTC3-214ENST00000561290 CYB5RLQ6IPT4 315 aa25.49■■□□□ 1.67
CRTC3-214ENST00000561290 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
CRTC3-214ENST00000561290 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
CRTC3-214ENST00000561290 NUP160Q12769 1436 aa25.41■■□□□ 1.66
CRTC3-214ENST00000561290 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
CRTC3-214ENST00000561290 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
CRTC3-214ENST00000561290 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
CRTC3-214ENST00000561290 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
CRTC3-214ENST00000561290 CUL7Q14999 1698 aa25.17■■□□□ 1.62
CRTC3-214ENST00000561290 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
CRTC3-214ENST00000561290 IGF1RP08069 1367 aa25.13■■□□□ 1.61
CRTC3-214ENST00000561290 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms