RNA–Protein interactions for RNA: ENST00000561264.6

MEIS2-223, Transcript of Meis homeobox 2, humanhuman

TSL 2

Gene MEIS2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-223ENST00000561264 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
MEIS2-223ENST00000561264 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
MEIS2-223ENST00000561264 ABCC9O60706 1549 aa18.46■□□□□ 0.55
MEIS2-223ENST00000561264 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
MEIS2-223ENST00000561264 NACADO15069 1562 aa17.91■□□□□ 0.46
MEIS2-223ENST00000561264 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
MEIS2-223ENST00000561264 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
MEIS2-223ENST00000561264 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
MEIS2-223ENST00000561264 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.43
MEIS2-223ENST00000561264 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
MEIS2-223ENST00000561264 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
MEIS2-223ENST00000561264 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
MEIS2-223ENST00000561264 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
MEIS2-223ENST00000561264 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
MEIS2-223ENST00000561264 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
MEIS2-223ENST00000561264 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
MEIS2-223ENST00000561264 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
MEIS2-223ENST00000561264 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
MEIS2-223ENST00000561264 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
MEIS2-223ENST00000561264 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
MEIS2-223ENST00000561264 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
MEIS2-223ENST00000561264 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
MEIS2-223ENST00000561264 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
MEIS2-223ENST00000561264 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
MEIS2-223ENST00000561264 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
MEIS2-223ENST00000561264 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
MEIS2-223ENST00000561264 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
MEIS2-223ENST00000561264 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
MEIS2-223ENST00000561264 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
MEIS2-223ENST00000561264 WIZO95785 1651 aa16.29■□□□□ 0.2
MEIS2-223ENST00000561264 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
MEIS2-223ENST00000561264 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
MEIS2-223ENST00000561264 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
MEIS2-223ENST00000561264 ERCC6Q03468 1493 aa16■□□□□ 0.15
MEIS2-223ENST00000561264 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
MEIS2-223ENST00000561264 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
MEIS2-223ENST00000561264 NESP48681 1621 aa15.95■□□□□ 0.14
MEIS2-223ENST00000561264 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
MEIS2-223ENST00000561264 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
MEIS2-223ENST00000561264 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
MEIS2-223ENST00000561264 CFTRP13569 1480 aa15.91■□□□□ 0.14
MEIS2-223ENST00000561264 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
MEIS2-223ENST00000561264 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
MEIS2-223ENST00000561264 CUX2O14529 1486 aa15.81■□□□□ 0.12
MEIS2-223ENST00000561264 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
MEIS2-223ENST00000561264 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
MEIS2-223ENST00000561264 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
MEIS2-223ENST00000561264 WDR62O43379 1518 aa15.7■□□□□ 0.1
MEIS2-223ENST00000561264 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
MEIS2-223ENST00000561264 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
MEIS2-223ENST00000561264 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
MEIS2-223ENST00000561264 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
MEIS2-223ENST00000561264 IFT140Q96RY7 1462 aa15.48■□□□□ 0.07
MEIS2-223ENST00000561264 CUX1P39880 1505 aa15.43■□□□□ 0.06
MEIS2-223ENST00000561264 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
MEIS2-223ENST00000561264 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
MEIS2-223ENST00000561264 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
MEIS2-223ENST00000561264 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
MEIS2-223ENST00000561264 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
MEIS2-223ENST00000561264 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
MEIS2-223ENST00000561264 SOGA1O94964 1423 aa15.37■□□□□ 0.05
MEIS2-223ENST00000561264 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
MEIS2-223ENST00000561264 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
MEIS2-223ENST00000561264 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
MEIS2-223ENST00000561264 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
MEIS2-223ENST00000561264 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
MEIS2-223ENST00000561264 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
MEIS2-223ENST00000561264 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.037e-8■■■■■ 27.4
MEIS2-223ENST00000561264 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
MEIS2-223ENST00000561264 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
MEIS2-223ENST00000561264 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
MEIS2-223ENST00000561264 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
MEIS2-223ENST00000561264 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
MEIS2-223ENST00000561264 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
MEIS2-223ENST00000561264 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
MEIS2-223ENST00000561264 ERICH3Q5RHP9 1530 aa15.13■□□□□ 0.01
MEIS2-223ENST00000561264 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
MEIS2-223ENST00000561264 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
MEIS2-223ENST00000561264 CHD1O14646 1710 aa15.12■□□□□ 0.01
MEIS2-223ENST00000561264 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
MEIS2-223ENST00000561264 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
MEIS2-223ENST00000561264 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
MEIS2-223ENST00000561264 FBLN2P98095 1184 aa15.09■□□□□ 0.01
MEIS2-223ENST00000561264 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
MEIS2-223ENST00000561264 ADAMTS12P58397 1594 aa15.07■□□□□ 0
MEIS2-223ENST00000561264 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
MEIS2-223ENST00000561264 CUL7Q14999 1698 aa15.05■□□□□ -0
MEIS2-223ENST00000561264 GRIN2AQ12879 1464 aa15□□□□□ -0.01
MEIS2-223ENST00000561264 IGF1RP08069 1367 aa14.96□□□□□ -0.02
MEIS2-223ENST00000561264 EEA1Q15075 1411 aa14.94□□□□□ -0.02
MEIS2-223ENST00000561264 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
MEIS2-223ENST00000561264 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
MEIS2-223ENST00000561264 NUP160Q12769 1436 aa14.91□□□□□ -0.02
MEIS2-223ENST00000561264 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
MEIS2-223ENST00000561264 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
MEIS2-223ENST00000561264 RAPGEF2Q9Y4G8 1499 aa14.88□□□□□ -0.03
MEIS2-223ENST00000561264 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
MEIS2-223ENST00000561264 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
MEIS2-223ENST00000561264 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
MEIS2-223ENST00000561264 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms