RNA–Protein interactions for RNA: ENST00000561252.1

SEMA4B-219, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 504 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-219ENST00000561252 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
SEMA4B-219ENST00000561252 ABCC9O60706 1549 aa28.48■■■□□ 2.15
SEMA4B-219ENST00000561252 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
SEMA4B-219ENST00000561252 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
SEMA4B-219ENST00000561252 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
SEMA4B-219ENST00000561252 NACADO15069 1562 aa26.84■■□□□ 1.89
SEMA4B-219ENST00000561252 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
SEMA4B-219ENST00000561252 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
SEMA4B-219ENST00000561252 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
SEMA4B-219ENST00000561252 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
SEMA4B-219ENST00000561252 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
SEMA4B-219ENST00000561252 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
SEMA4B-219ENST00000561252 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
SEMA4B-219ENST00000561252 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
SEMA4B-219ENST00000561252 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
SEMA4B-219ENST00000561252 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
SEMA4B-219ENST00000561252 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
SEMA4B-219ENST00000561252 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
SEMA4B-219ENST00000561252 DNAJC5Q9H3Z4 198 aa24.93■■□□□ 1.58
SEMA4B-219ENST00000561252 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
SEMA4B-219ENST00000561252 CUX2O14529 1486 aa24.69■■□□□ 1.54
SEMA4B-219ENST00000561252 ATAD2BQ9ULI0 1458 aa24.67■■□□□ 1.54
SEMA4B-219ENST00000561252 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
SEMA4B-219ENST00000561252 SMARCA2P51531 1590 aa24.58■■□□□ 1.52
SEMA4B-219ENST00000561252 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
SEMA4B-219ENST00000561252 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
SEMA4B-219ENST00000561252 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
SEMA4B-219ENST00000561252 NESP48681 1621 aa24.41■■□□□ 1.5
SEMA4B-219ENST00000561252 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
SEMA4B-219ENST00000561252 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
SEMA4B-219ENST00000561252 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
SEMA4B-219ENST00000561252 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
SEMA4B-219ENST00000561252 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
SEMA4B-219ENST00000561252 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
SEMA4B-219ENST00000561252 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.44
SEMA4B-219ENST00000561252 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
SEMA4B-219ENST00000561252 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
SEMA4B-219ENST00000561252 WIZO95785 1651 aa23.89■■□□□ 1.42
SEMA4B-219ENST00000561252 WDR62O43379 1518 aa23.86■■□□□ 1.41
SEMA4B-219ENST00000561252 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
SEMA4B-219ENST00000561252 FANCD2Q9BXW9 1451 aa23.72■■□□□ 1.39
SEMA4B-219ENST00000561252 CFTRP13569 1480 aa23.7■■□□□ 1.38
SEMA4B-219ENST00000561252 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
SEMA4B-219ENST00000561252 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
SEMA4B-219ENST00000561252 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
SEMA4B-219ENST00000561252 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
SEMA4B-219ENST00000561252 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
SEMA4B-219ENST00000561252 PRDM2Q13029 1718 aa23.4■■□□□ 1.34
SEMA4B-219ENST00000561252 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
SEMA4B-219ENST00000561252 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
SEMA4B-219ENST00000561252 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
SEMA4B-219ENST00000561252 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
SEMA4B-219ENST00000561252 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
SEMA4B-219ENST00000561252 RIMBP3CA6NJZ7 1639 aa23.21■■□□□ 1.31
SEMA4B-219ENST00000561252 RIMBP3BA6NNM3 1639 aa23.21■■□□□ 1.31
SEMA4B-219ENST00000561252 RIMBP3Q9UFD9 1639 aa23.21■■□□□ 1.31
SEMA4B-219ENST00000561252 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
SEMA4B-219ENST00000561252 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
SEMA4B-219ENST00000561252 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
SEMA4B-219ENST00000561252 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
SEMA4B-219ENST00000561252 AQRO60306 1485 aaKnown RBP eCLIP23.04■■□□□ 1.287e-8■■■■■ 34.1
SEMA4B-219ENST00000561252 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
SEMA4B-219ENST00000561252 CHD1O14646 1710 aa22.97■■□□□ 1.27
SEMA4B-219ENST00000561252 CYB5RLQ6IPT4 315 aa22.95■■□□□ 1.26
SEMA4B-219ENST00000561252 FBLN2P98095 1184 aa22.9■■□□□ 1.26
SEMA4B-219ENST00000561252 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
SEMA4B-219ENST00000561252 SOGA1O94964 1423 aa22.9■■□□□ 1.26
SEMA4B-219ENST00000561252 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
SEMA4B-219ENST00000561252 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
SEMA4B-219ENST00000561252 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
SEMA4B-219ENST00000561252 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
SEMA4B-219ENST00000561252 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
SEMA4B-219ENST00000561252 CUX1P39880 1505 aa22.76■■□□□ 1.23
SEMA4B-219ENST00000561252 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
SEMA4B-219ENST00000561252 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
SEMA4B-219ENST00000561252 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
SEMA4B-219ENST00000561252 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
SEMA4B-219ENST00000561252 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
SEMA4B-219ENST00000561252 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
SEMA4B-219ENST00000561252 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
SEMA4B-219ENST00000561252 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
SEMA4B-219ENST00000561252 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
SEMA4B-219ENST00000561252 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
SEMA4B-219ENST00000561252 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
SEMA4B-219ENST00000561252 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
SEMA4B-219ENST00000561252 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
SEMA4B-219ENST00000561252 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
SEMA4B-219ENST00000561252 NUP160Q12769 1436 aa22.38■■□□□ 1.17
SEMA4B-219ENST00000561252 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
SEMA4B-219ENST00000561252 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
SEMA4B-219ENST00000561252 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
SEMA4B-219ENST00000561252 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
SEMA4B-219ENST00000561252 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
SEMA4B-219ENST00000561252 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
SEMA4B-219ENST00000561252 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
SEMA4B-219ENST00000561252 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
SEMA4B-219ENST00000561252 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
SEMA4B-219ENST00000561252 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
SEMA4B-219ENST00000561252 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
SEMA4B-219ENST00000561252 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms