RNA–Protein interactions for RNA: ENST00000561196.5

KNSTRN-214, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-214ENST00000561196 NISCHQ9Y2I1 1504 aa45.81■■■■■ 4.92
KNSTRN-214ENST00000561196 CCDC180Q9P1Z9 1646 aa41.02■■■■■ 4.16
KNSTRN-214ENST00000561196 ABCC9O60706 1549 aa40.64■■■■■ 4.1
KNSTRN-214ENST00000561196 RB1CC1Q8TDY2 1594 aa38.86■■■■□ 3.81
KNSTRN-214ENST00000561196 NACADO15069 1562 aa38.65■■■■□ 3.78
KNSTRN-214ENST00000561196 DCAF8L2P0C7V8 631 aa38.44■■■■□ 3.74
KNSTRN-214ENST00000561196 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
KNSTRN-214ENST00000561196 ZCCHC6Q5VYS8 1495 aaKnown RBP38.07■■■■□ 3.68
KNSTRN-214ENST00000561196 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
KNSTRN-214ENST00000561196 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
KNSTRN-214ENST00000561196 PABPN1Q86U42 306 aaKnown RBP eCLIP37.83■■■■□ 3.65
KNSTRN-214ENST00000561196 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
KNSTRN-214ENST00000561196 BICRAQ9NZM4 1560 aa37.7■■■■□ 3.63
KNSTRN-214ENST00000561196 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
KNSTRN-214ENST00000561196 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
KNSTRN-214ENST00000561196 EIF4G1Q04637 1599 aaKnown RBP36.76■■■■□ 3.48
KNSTRN-214ENST00000561196 CC2D2AQ9P2K1 1620 aa36.75■■■■□ 3.47
KNSTRN-214ENST00000561196 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
KNSTRN-214ENST00000561196 SMARCA4P51532 1647 aa35.7■■■■□ 3.31
KNSTRN-214ENST00000561196 NCAPD3P42695 1498 aa35.64■■■■□ 3.3
KNSTRN-214ENST00000561196 ATAD2BQ9ULI0 1458 aa35.6■■■■□ 3.29
KNSTRN-214ENST00000561196 BAZ1AQ9NRL2 1556 aaPredicted RBP35.56■■■■□ 3.28
KNSTRN-214ENST00000561196 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
KNSTRN-214ENST00000561196 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
KNSTRN-214ENST00000561196 PEG3Q9GZU2 1588 aa35.33■■■■□ 3.25
KNSTRN-214ENST00000561196 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
KNSTRN-214ENST00000561196 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
KNSTRN-214ENST00000561196 ERCC6Q03468 1493 aa35.09■■■■□ 3.21
KNSTRN-214ENST00000561196 NESP48681 1621 aa35.01■■■■□ 3.19
KNSTRN-214ENST00000561196 WIZO95785 1651 aa34.92■■■■□ 3.18
KNSTRN-214ENST00000561196 CUX2O14529 1486 aa34.9■■■■□ 3.18
KNSTRN-214ENST00000561196 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
KNSTRN-214ENST00000561196 RSF1Q96T23 1441 aaPredicted RBP34.67■■■■□ 3.14
KNSTRN-214ENST00000561196 THOC2Q8NI27 1593 aaKnown RBP34.64■■■■□ 3.14
KNSTRN-214ENST00000561196 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
KNSTRN-214ENST00000561196 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
KNSTRN-214ENST00000561196 CADPSQ9ULU8 1353 aa34.57■■■■□ 3.12
KNSTRN-214ENST00000561196 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
KNSTRN-214ENST00000561196 DNAJC5Q9H3Z4 198 aa34.4■■■■□ 3.1
KNSTRN-214ENST00000561196 MRC2Q9UBG0 1479 aa34.3■■■■□ 3.08
KNSTRN-214ENST00000561196 CFTRP13569 1480 aa34.27■■■■□ 3.08
KNSTRN-214ENST00000561196 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
KNSTRN-214ENST00000561196 WDR62O43379 1518 aa34.22■■■■□ 3.07
KNSTRN-214ENST00000561196 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
KNSTRN-214ENST00000561196 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.04
KNSTRN-214ENST00000561196 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
KNSTRN-214ENST00000561196 URB2Q14146 1524 aaKnown RBP33.92■■■■□ 3.02
KNSTRN-214ENST00000561196 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
KNSTRN-214ENST00000561196 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
KNSTRN-214ENST00000561196 ABCC8Q09428 1581 aa33.54■■■□□ 2.96
KNSTRN-214ENST00000561196 IFT140Q96RY7 1462 aa33.52■■■□□ 2.96
KNSTRN-214ENST00000561196 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
KNSTRN-214ENST00000561196 SUPT5HO00267 1087 aaKnown RBP33.36■■■□□ 2.93
KNSTRN-214ENST00000561196 EIF4G3O43432 1585 aaKnown RBP33.33■■■□□ 2.93
KNSTRN-214ENST00000561196 TARBP1Q13395 1621 aaKnown RBP33.3■■■□□ 2.92
KNSTRN-214ENST00000561196 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
KNSTRN-214ENST00000561196 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
KNSTRN-214ENST00000561196 CUX1P39880 1505 aa33.16■■■□□ 2.9
KNSTRN-214ENST00000561196 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.92e-11■■■□□ 14.8
KNSTRN-214ENST00000561196 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
KNSTRN-214ENST00000561196 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
KNSTRN-214ENST00000561196 SOGA1O94964 1423 aa33.11■■■□□ 2.89
KNSTRN-214ENST00000561196 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
KNSTRN-214ENST00000561196 CHD1O14646 1710 aa33.02■■■□□ 2.88
KNSTRN-214ENST00000561196 WDR97A6NE52 1622 aa33.01■■■□□ 2.87
KNSTRN-214ENST00000561196 TDRD9Q8NDG6 1382 aaKnown RBP32.99■■■□□ 2.87
KNSTRN-214ENST00000561196 RIMBP3CA6NJZ7 1639 aa32.91■■■□□ 2.86
KNSTRN-214ENST00000561196 RIMBP3BA6NNM3 1639 aa32.91■■■□□ 2.86
KNSTRN-214ENST00000561196 RIMBP3Q9UFD9 1639 aa32.91■■■□□ 2.86
KNSTRN-214ENST00000561196 SNAPC4Q5SXM2 1469 aa32.87■■■□□ 2.85
KNSTRN-214ENST00000561196 FBLN2P98095 1184 aa32.85■■■□□ 2.85
KNSTRN-214ENST00000561196 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
KNSTRN-214ENST00000561196 GRIN2BQ13224 1484 aa32.81■■■□□ 2.84
KNSTRN-214ENST00000561196 MAGI1Q96QZ7 1491 aaPredicted RBP32.79■■■□□ 2.84
KNSTRN-214ENST00000561196 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
KNSTRN-214ENST00000561196 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
KNSTRN-214ENST00000561196 BIVM-ERCC5R4GMW8 1640 aa32.76■■■□□ 2.83
KNSTRN-214ENST00000561196 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
KNSTRN-214ENST00000561196 TOP2BQ02880 1626 aa32.73■■■□□ 2.83
KNSTRN-214ENST00000561196 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
KNSTRN-214ENST00000561196 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
KNSTRN-214ENST00000561196 SYNJ1O43426 1573 aa32.71■■■□□ 2.83
KNSTRN-214ENST00000561196 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
KNSTRN-214ENST00000561196 CHMP7Q8WUX9 453 aaPredicted RBP32.65■■■□□ 2.82
KNSTRN-214ENST00000561196 CLASP1Q7Z460 1538 aa32.62■■■□□ 2.81
KNSTRN-214ENST00000561196 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
KNSTRN-214ENST00000561196 CYB5RLQ6IPT4 315 aa32.48■■■□□ 2.79
KNSTRN-214ENST00000561196 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
KNSTRN-214ENST00000561196 GRIN2AQ12879 1464 aa32.4■■■□□ 2.78
KNSTRN-214ENST00000561196 ERICH3Q5RHP9 1530 aa32.38■■■□□ 2.77
KNSTRN-214ENST00000561196 FHAD1B1AJZ9 1412 aa32.33■■■□□ 2.77
KNSTRN-214ENST00000561196 CEP170Q5SW79 1584 aa32.29■■■□□ 2.76
KNSTRN-214ENST00000561196 NUP160Q12769 1436 aa32.26■■■□□ 2.76
KNSTRN-214ENST00000561196 ERCC6L2Q5T890 1561 aa32.13■■■□□ 2.73
KNSTRN-214ENST00000561196 SHROOM2Q13796 1616 aa32.12■■■□□ 2.73
KNSTRN-214ENST00000561196 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
KNSTRN-214ENST00000561196 TRHP20396 242 aaPredicted RBP32.04■■■□□ 2.72
KNSTRN-214ENST00000561196 CUL7Q14999 1698 aa32.02■■■□□ 2.72
KNSTRN-214ENST00000561196 RUSC2Q8N2Y8 1516 aa32.01■■■□□ 2.72
KNSTRN-214ENST00000561196 IGF1RP08069 1367 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms