RNA–Protein interactions for RNA: ENST00000561172.1

INO80-209, Transcript of INO80 complex subunit, humanhuman

TSL 2

Gene INO80, Length 402 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-209ENST00000561172 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
INO80-209ENST00000561172 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
INO80-209ENST00000561172 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
INO80-209ENST00000561172 ABCC9O60706 1549 aa14.57□□□□□ -0.08
INO80-209ENST00000561172 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.09
INO80-209ENST00000561172 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
INO80-209ENST00000561172 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
INO80-209ENST00000561172 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
INO80-209ENST00000561172 NACADO15069 1562 aa13.78□□□□□ -0.2
INO80-209ENST00000561172 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
INO80-209ENST00000561172 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
INO80-209ENST00000561172 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
INO80-209ENST00000561172 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
INO80-209ENST00000561172 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
INO80-209ENST00000561172 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
INO80-209ENST00000561172 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
INO80-209ENST00000561172 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
INO80-209ENST00000561172 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
INO80-209ENST00000561172 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
INO80-209ENST00000561172 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
INO80-209ENST00000561172 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
INO80-209ENST00000561172 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
INO80-209ENST00000561172 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
INO80-209ENST00000561172 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
INO80-209ENST00000561172 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
INO80-209ENST00000561172 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
INO80-209ENST00000561172 CUX2O14529 1486 aa12.65□□□□□ -0.38
INO80-209ENST00000561172 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
INO80-209ENST00000561172 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
INO80-209ENST00000561172 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
INO80-209ENST00000561172 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
INO80-209ENST00000561172 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
INO80-209ENST00000561172 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
INO80-209ENST00000561172 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
INO80-209ENST00000561172 FOXD1Q16676 465 aa12.5□□□□□ -0.41
INO80-209ENST00000561172 NESP48681 1621 aa12.49□□□□□ -0.41
INO80-209ENST00000561172 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
INO80-209ENST00000561172 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
INO80-209ENST00000561172 PDS5BQ9NTI5 1447 aa12.39□□□□□ -0.43
INO80-209ENST00000561172 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
INO80-209ENST00000561172 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
INO80-209ENST00000561172 ADRA2BP18089 450 aa12.35□□□□□ -0.43
INO80-209ENST00000561172 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
INO80-209ENST00000561172 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
INO80-209ENST00000561172 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
INO80-209ENST00000561172 WIZO95785 1651 aa12.25□□□□□ -0.45
INO80-209ENST00000561172 WDR62O43379 1518 aa12.22□□□□□ -0.45
INO80-209ENST00000561172 CFTRP13569 1480 aa12.18□□□□□ -0.46
INO80-209ENST00000561172 CEP164Q9UPV0 1460 aa12.18□□□□□ -0.46
INO80-209ENST00000561172 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
INO80-209ENST00000561172 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
INO80-209ENST00000561172 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
INO80-209ENST00000561172 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
INO80-209ENST00000561172 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
INO80-209ENST00000561172 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
INO80-209ENST00000561172 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
INO80-209ENST00000561172 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
INO80-209ENST00000561172 IFT140Q96RY7 1462 aa11.96□□□□□ -0.49
INO80-209ENST00000561172 ABCC8Q09428 1581 aa11.95□□□□□ -0.5
INO80-209ENST00000561172 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
INO80-209ENST00000561172 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
INO80-209ENST00000561172 DNMBPQ6XZF7 1577 aa11.87□□□□□ -0.51
INO80-209ENST00000561172 PIAS4Q8N2W9 510 aaPredicted RBP11.86□□□□□ -0.51
INO80-209ENST00000561172 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
INO80-209ENST00000561172 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
INO80-209ENST00000561172 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
INO80-209ENST00000561172 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
INO80-209ENST00000561172 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
INO80-209ENST00000561172 EIF4G3O43432 1585 aaKnown RBP11.82□□□□□ -0.52
INO80-209ENST00000561172 AQRO60306 1485 aaKnown RBP eCLIP11.82□□□□□ -0.52
INO80-209ENST00000561172 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
INO80-209ENST00000561172 KCNA4P22459 653 aa11.78□□□□□ -0.52
INO80-209ENST00000561172 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
INO80-209ENST00000561172 SOGA1O94964 1423 aa11.77□□□□□ -0.53
INO80-209ENST00000561172 FBLN2P98095 1184 aa11.75□□□□□ -0.53
INO80-209ENST00000561172 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
INO80-209ENST00000561172 CHD1O14646 1710 aa11.74□□□□□ -0.53
INO80-209ENST00000561172 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
INO80-209ENST00000561172 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
INO80-209ENST00000561172 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
INO80-209ENST00000561172 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
INO80-209ENST00000561172 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
INO80-209ENST00000561172 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
INO80-209ENST00000561172 CUX1P39880 1505 aa11.67□□□□□ -0.54
INO80-209ENST00000561172 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
INO80-209ENST00000561172 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
INO80-209ENST00000561172 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
INO80-209ENST00000561172 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.55
INO80-209ENST00000561172 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
INO80-209ENST00000561172 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
INO80-209ENST00000561172 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
INO80-209ENST00000561172 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
INO80-209ENST00000561172 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
INO80-209ENST00000561172 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
INO80-209ENST00000561172 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
INO80-209ENST00000561172 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
INO80-209ENST00000561172 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
INO80-209ENST00000561172 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
INO80-209ENST00000561172 NUP160Q12769 1436 aa11.49□□□□□ -0.57
INO80-209ENST00000561172 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms