RNA–Protein interactions for RNA: ENST00000561133.5

SEMA6D-217, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-217ENST00000561133 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
SEMA6D-217ENST00000561133 ABCC9O60706 1549 aa14.88□□□□□ -0.03
SEMA6D-217ENST00000561133 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
SEMA6D-217ENST00000561133 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
SEMA6D-217ENST00000561133 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
SEMA6D-217ENST00000561133 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
SEMA6D-217ENST00000561133 NACADO15069 1562 aa13.95□□□□□ -0.18
SEMA6D-217ENST00000561133 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
SEMA6D-217ENST00000561133 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
SEMA6D-217ENST00000561133 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
SEMA6D-217ENST00000561133 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
SEMA6D-217ENST00000561133 CHIC1Q5VXU3 224 aa13.64□□□□□ -0.23
SEMA6D-217ENST00000561133 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
SEMA6D-217ENST00000561133 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
SEMA6D-217ENST00000561133 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
SEMA6D-217ENST00000561133 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
SEMA6D-217ENST00000561133 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
SEMA6D-217ENST00000561133 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
SEMA6D-217ENST00000561133 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
SEMA6D-217ENST00000561133 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
SEMA6D-217ENST00000561133 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
SEMA6D-217ENST00000561133 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
SEMA6D-217ENST00000561133 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
SEMA6D-217ENST00000561133 CUX2O14529 1486 aa12.88□□□□□ -0.35
SEMA6D-217ENST00000561133 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
SEMA6D-217ENST00000561133 ATAD2BQ9ULI0 1458 aa12.8□□□□□ -0.36
SEMA6D-217ENST00000561133 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
SEMA6D-217ENST00000561133 SMARCA4P51532 1647 aa12.77□□□□□ -0.36
SEMA6D-217ENST00000561133 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
SEMA6D-217ENST00000561133 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
SEMA6D-217ENST00000561133 NESP48681 1621 aa12.72□□□□□ -0.37
SEMA6D-217ENST00000561133 BAZ1AQ9NRL2 1556 aaPredicted RBP12.7□□□□□ -0.38
SEMA6D-217ENST00000561133 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
SEMA6D-217ENST00000561133 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
SEMA6D-217ENST00000561133 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
SEMA6D-217ENST00000561133 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
SEMA6D-217ENST00000561133 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
SEMA6D-217ENST00000561133 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
SEMA6D-217ENST00000561133 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
SEMA6D-217ENST00000561133 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
SEMA6D-217ENST00000561133 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
SEMA6D-217ENST00000561133 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
SEMA6D-217ENST00000561133 WDR62O43379 1518 aa12.42□□□□□ -0.42
SEMA6D-217ENST00000561133 WIZO95785 1651 aa12.42□□□□□ -0.42
SEMA6D-217ENST00000561133 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.43
SEMA6D-217ENST00000561133 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
SEMA6D-217ENST00000561133 CFTRP13569 1480 aa12.29□□□□□ -0.44
SEMA6D-217ENST00000561133 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
SEMA6D-217ENST00000561133 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
SEMA6D-217ENST00000561133 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
SEMA6D-217ENST00000561133 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
SEMA6D-217ENST00000561133 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
SEMA6D-217ENST00000561133 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
SEMA6D-217ENST00000561133 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
SEMA6D-217ENST00000561133 RIMBP3CA6NJZ7 1639 aa12.12□□□□□ -0.47
SEMA6D-217ENST00000561133 RIMBP3BA6NNM3 1639 aa12.12□□□□□ -0.47
SEMA6D-217ENST00000561133 RIMBP3Q9UFD9 1639 aa12.12□□□□□ -0.47
SEMA6D-217ENST00000561133 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
SEMA6D-217ENST00000561133 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
SEMA6D-217ENST00000561133 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
SEMA6D-217ENST00000561133 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
SEMA6D-217ENST00000561133 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
SEMA6D-217ENST00000561133 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
SEMA6D-217ENST00000561133 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
SEMA6D-217ENST00000561133 FBLN2P98095 1184 aa12.02□□□□□ -0.49
SEMA6D-217ENST00000561133 CYB5RLQ6IPT4 315 aa12.01□□□□□ -0.49
SEMA6D-217ENST00000561133 CHD1O14646 1710 aa12□□□□□ -0.49
SEMA6D-217ENST00000561133 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
SEMA6D-217ENST00000561133 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
SEMA6D-217ENST00000561133 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
SEMA6D-217ENST00000561133 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
SEMA6D-217ENST00000561133 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
SEMA6D-217ENST00000561133 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
SEMA6D-217ENST00000561133 SOGA1O94964 1423 aa11.92□□□□□ -0.5
SEMA6D-217ENST00000561133 TDRD9Q8NDG6 1382 aaKnown RBP11.91□□□□□ -0.5
SEMA6D-217ENST00000561133 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
SEMA6D-217ENST00000561133 CHMP7Q8WUX9 453 aaPredicted RBP11.88□□□□□ -0.51
SEMA6D-217ENST00000561133 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
SEMA6D-217ENST00000561133 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
SEMA6D-217ENST00000561133 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
SEMA6D-217ENST00000561133 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
SEMA6D-217ENST00000561133 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
SEMA6D-217ENST00000561133 CLASP1Q7Z460 1538 aa11.83□□□□□ -0.52
SEMA6D-217ENST00000561133 CUX1P39880 1505 aa11.81□□□□□ -0.52
SEMA6D-217ENST00000561133 SYNJ2O15056 1496 aa11.81□□□□□ -0.52
SEMA6D-217ENST00000561133 FOXD1Q16676 465 aa11.79□□□□□ -0.52
SEMA6D-217ENST00000561133 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
SEMA6D-217ENST00000561133 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
SEMA6D-217ENST00000561133 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
SEMA6D-217ENST00000561133 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.53
SEMA6D-217ENST00000561133 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
SEMA6D-217ENST00000561133 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
SEMA6D-217ENST00000561133 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
SEMA6D-217ENST00000561133 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
SEMA6D-217ENST00000561133 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
SEMA6D-217ENST00000561133 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
SEMA6D-217ENST00000561133 MSH5O43196 834 aa11.63□□□□□ -0.55
SEMA6D-217ENST00000561133 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
SEMA6D-217ENST00000561133 NUP160Q12769 1436 aa11.61□□□□□ -0.55
SEMA6D-217ENST00000561133 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms