RNA–Protein interactions for RNA: ENST00000561103.1

PSME2-216, Transcript of proteasome activator subunit 2, humanhuman

TSL 3

Gene PSME2, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME2-216ENST00000561103 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
PSME2-216ENST00000561103 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
PSME2-216ENST00000561103 ABCC9O60706 1549 aa24.53■■□□□ 1.52
PSME2-216ENST00000561103 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
PSME2-216ENST00000561103 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
PSME2-216ENST00000561103 NACADO15069 1562 aa23.46■■□□□ 1.35
PSME2-216ENST00000561103 ZCCHC6Q5VYS8 1495 aaKnown RBP23.27■■□□□ 1.32
PSME2-216ENST00000561103 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
PSME2-216ENST00000561103 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
PSME2-216ENST00000561103 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
PSME2-216ENST00000561103 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
PSME2-216ENST00000561103 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
PSME2-216ENST00000561103 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
PSME2-216ENST00000561103 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
PSME2-216ENST00000561103 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
PSME2-216ENST00000561103 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PSME2-216ENST00000561103 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
PSME2-216ENST00000561103 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
PSME2-216ENST00000561103 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
PSME2-216ENST00000561103 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
PSME2-216ENST00000561103 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
PSME2-216ENST00000561103 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
PSME2-216ENST00000561103 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
PSME2-216ENST00000561103 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
PSME2-216ENST00000561103 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
PSME2-216ENST00000561103 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
PSME2-216ENST00000561103 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
PSME2-216ENST00000561103 WIZO95785 1651 aa21.38■■□□□ 1.01
PSME2-216ENST00000561103 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
PSME2-216ENST00000561103 NESP48681 1621 aa21.19■□□□□ 0.98
PSME2-216ENST00000561103 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
PSME2-216ENST00000561103 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
PSME2-216ENST00000561103 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
PSME2-216ENST00000561103 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
PSME2-216ENST00000561103 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
PSME2-216ENST00000561103 KIF21AQ7Z4S6 1674 aa20.98■□□□□ 0.95
PSME2-216ENST00000561103 CUX2O14529 1486 aa20.94■□□□□ 0.94
PSME2-216ENST00000561103 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
PSME2-216ENST00000561103 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
PSME2-216ENST00000561103 CFTRP13569 1480 aa20.86■□□□□ 0.93
PSME2-216ENST00000561103 FANCD2Q9BXW9 1451 aa20.79■□□□□ 0.92
PSME2-216ENST00000561103 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
PSME2-216ENST00000561103 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
PSME2-216ENST00000561103 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
PSME2-216ENST00000561103 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
PSME2-216ENST00000561103 WDR62O43379 1518 aa20.68■□□□□ 0.9
PSME2-216ENST00000561103 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
PSME2-216ENST00000561103 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
PSME2-216ENST00000561103 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
PSME2-216ENST00000561103 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
PSME2-216ENST00000561103 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PSME2-216ENST00000561103 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
PSME2-216ENST00000561103 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
PSME2-216ENST00000561103 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
PSME2-216ENST00000561103 CUX1P39880 1505 aa20.24■□□□□ 0.83
PSME2-216ENST00000561103 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
PSME2-216ENST00000561103 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
PSME2-216ENST00000561103 SOGA1O94964 1423 aa20.19■□□□□ 0.82
PSME2-216ENST00000561103 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
PSME2-216ENST00000561103 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
PSME2-216ENST00000561103 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
PSME2-216ENST00000561103 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
PSME2-216ENST00000561103 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
PSME2-216ENST00000561103 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
PSME2-216ENST00000561103 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
PSME2-216ENST00000561103 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
PSME2-216ENST00000561103 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
PSME2-216ENST00000561103 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
PSME2-216ENST00000561103 CHD1O14646 1710 aa19.99■□□□□ 0.79
PSME2-216ENST00000561103 FBLN2P98095 1184 aa19.99■□□□□ 0.79
PSME2-216ENST00000561103 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
PSME2-216ENST00000561103 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
PSME2-216ENST00000561103 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
PSME2-216ENST00000561103 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
PSME2-216ENST00000561103 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
PSME2-216ENST00000561103 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
PSME2-216ENST00000561103 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
PSME2-216ENST00000561103 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
PSME2-216ENST00000561103 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
PSME2-216ENST00000561103 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
PSME2-216ENST00000561103 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
PSME2-216ENST00000561103 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
PSME2-216ENST00000561103 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
PSME2-216ENST00000561103 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
PSME2-216ENST00000561103 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
PSME2-216ENST00000561103 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
PSME2-216ENST00000561103 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
PSME2-216ENST00000561103 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
PSME2-216ENST00000561103 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
PSME2-216ENST00000561103 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
PSME2-216ENST00000561103 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
PSME2-216ENST00000561103 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
PSME2-216ENST00000561103 IGF1RP08069 1367 aa19.59■□□□□ 0.73
PSME2-216ENST00000561103 NUP160Q12769 1436 aa19.59■□□□□ 0.73
PSME2-216ENST00000561103 CUL7Q14999 1698 aa19.58■□□□□ 0.72
PSME2-216ENST00000561103 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
PSME2-216ENST00000561103 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
PSME2-216ENST00000561103 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
PSME2-216ENST00000561103 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
PSME2-216ENST00000561103 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms