RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 NISCHQ9Y2I1 1504 aa37.89■■■■□ 3.66
SHF-209ENST00000561091 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
SHF-209ENST00000561091 ABCC9O60706 1549 aa32.3■■■□□ 2.76
SHF-209ENST00000561091 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
SHF-209ENST00000561091 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
SHF-209ENST00000561091 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
SHF-209ENST00000561091 NACADO15069 1562 aa31.32■■■□□ 2.6
SHF-209ENST00000561091 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.59
SHF-209ENST00000561091 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
SHF-209ENST00000561091 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
SHF-209ENST00000561091 SCRIBQ14160 1630 aa30.66■■■□□ 2.5
SHF-209ENST00000561091 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
SHF-209ENST00000561091 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
SHF-209ENST00000561091 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
SHF-209ENST00000561091 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
SHF-209ENST00000561091 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
SHF-209ENST00000561091 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
SHF-209ENST00000561091 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
SHF-209ENST00000561091 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
SHF-209ENST00000561091 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
SHF-209ENST00000561091 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
SHF-209ENST00000561091 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
SHF-209ENST00000561091 WIZO95785 1651 aa29.02■■■□□ 2.24
SHF-209ENST00000561091 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
SHF-209ENST00000561091 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
SHF-209ENST00000561091 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
SHF-209ENST00000561091 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
SHF-209ENST00000561091 HMGXB3Q12766 1538 aa28.8■■■□□ 2.2
SHF-209ENST00000561091 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
SHF-209ENST00000561091 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
SHF-209ENST00000561091 TOP2AP11388 1531 aaKnown RBP28.67■■■□□ 2.18
SHF-209ENST00000561091 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
SHF-209ENST00000561091 NESP48681 1621 aa28.12■■■□□ 2.09
SHF-209ENST00000561091 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
SHF-209ENST00000561091 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
SHF-209ENST00000561091 CFTRP13569 1480 aa28.01■■■□□ 2.07
SHF-209ENST00000561091 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
SHF-209ENST00000561091 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
SHF-209ENST00000561091 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
SHF-209ENST00000561091 FANCD2Q9BXW9 1451 aa27.78■■■□□ 2.04
SHF-209ENST00000561091 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
SHF-209ENST00000561091 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
SHF-209ENST00000561091 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
SHF-209ENST00000561091 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
SHF-209ENST00000561091 ABCC8Q09428 1581 aa27.52■■■□□ 2
SHF-209ENST00000561091 URB2Q14146 1524 aaKnown RBP27.5■■□□□ 1.99
SHF-209ENST00000561091 WDR62O43379 1518 aa27.44■■□□□ 1.98
SHF-209ENST00000561091 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
SHF-209ENST00000561091 CUX1P39880 1505 aa27.41■■□□□ 1.98
SHF-209ENST00000561091 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
SHF-209ENST00000561091 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
SHF-209ENST00000561091 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
SHF-209ENST00000561091 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
SHF-209ENST00000561091 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SHF-209ENST00000561091 CUX2O14529 1486 aa27.24■■□□□ 1.95
SHF-209ENST00000561091 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
SHF-209ENST00000561091 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.95
SHF-209ENST00000561091 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
SHF-209ENST00000561091 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
SHF-209ENST00000561091 TARBP1Q13395 1621 aaKnown RBP27.09■■□□□ 1.93
SHF-209ENST00000561091 SOGA1O94964 1423 aa27.08■■□□□ 1.93
SHF-209ENST00000561091 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
SHF-209ENST00000561091 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
SHF-209ENST00000561091 WDR97A6NE52 1622 aa27.04■■□□□ 1.92
SHF-209ENST00000561091 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.91
SHF-209ENST00000561091 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.9
SHF-209ENST00000561091 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
SHF-209ENST00000561091 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
SHF-209ENST00000561091 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
SHF-209ENST00000561091 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
SHF-209ENST00000561091 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
SHF-209ENST00000561091 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
SHF-209ENST00000561091 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
SHF-209ENST00000561091 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
SHF-209ENST00000561091 GRIN2BQ13224 1484 aa26.69■■□□□ 1.86
SHF-209ENST00000561091 ERICH3Q5RHP9 1530 aa26.64■■□□□ 1.85
SHF-209ENST00000561091 SNAPC4Q5SXM2 1469 aa26.63■■□□□ 1.85
SHF-209ENST00000561091 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
SHF-209ENST00000561091 IGF1RP08069 1367 aa26.58■■□□□ 1.84
SHF-209ENST00000561091 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
SHF-209ENST00000561091 ADAMTS12P58397 1594 aa26.56■■□□□ 1.84
SHF-209ENST00000561091 EEA1Q15075 1411 aa26.55■■□□□ 1.84
SHF-209ENST00000561091 CUL7Q14999 1698 aa26.54■■□□□ 1.84
SHF-209ENST00000561091 CHD1O14646 1710 aa26.52■■□□□ 1.84
SHF-209ENST00000561091 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
SHF-209ENST00000561091 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
SHF-209ENST00000561091 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
SHF-209ENST00000561091 CARMIL1Q5VZK9 1371 aa26.44■■□□□ 1.82
SHF-209ENST00000561091 FBLN2P98095 1184 aa26.42■■□□□ 1.82
SHF-209ENST00000561091 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
SHF-209ENST00000561091 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
SHF-209ENST00000561091 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
SHF-209ENST00000561091 RAPGEF2Q9Y4G8 1499 aa26.35■■□□□ 1.81
SHF-209ENST00000561091 KIF21BO75037 1637 aa26.32■■□□□ 1.8
SHF-209ENST00000561091 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
SHF-209ENST00000561091 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
SHF-209ENST00000561091 NUP160Q12769 1436 aa26.21■■□□□ 1.79
SHF-209ENST00000561091 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
SHF-209ENST00000561091 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
SHF-209ENST00000561091 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms