RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
SPG21-214ENST00000561088 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
SPG21-214ENST00000561088 ABCC9O60706 1549 aa26.43■■□□□ 1.82
SPG21-214ENST00000561088 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
SPG21-214ENST00000561088 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
SPG21-214ENST00000561088 NACADO15069 1562 aa25.22■■□□□ 1.63
SPG21-214ENST00000561088 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
SPG21-214ENST00000561088 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
SPG21-214ENST00000561088 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
SPG21-214ENST00000561088 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
SPG21-214ENST00000561088 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
SPG21-214ENST00000561088 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
SPG21-214ENST00000561088 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
SPG21-214ENST00000561088 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
SPG21-214ENST00000561088 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
SPG21-214ENST00000561088 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
SPG21-214ENST00000561088 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
SPG21-214ENST00000561088 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
SPG21-214ENST00000561088 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
SPG21-214ENST00000561088 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
SPG21-214ENST00000561088 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
SPG21-214ENST00000561088 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
SPG21-214ENST00000561088 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
SPG21-214ENST00000561088 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
SPG21-214ENST00000561088 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
SPG21-214ENST00000561088 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
SPG21-214ENST00000561088 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
SPG21-214ENST00000561088 WIZO95785 1651 aa22.9■■□□□ 1.26
SPG21-214ENST00000561088 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
SPG21-214ENST00000561088 NESP48681 1621 aa22.79■■□□□ 1.24
SPG21-214ENST00000561088 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
SPG21-214ENST00000561088 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
SPG21-214ENST00000561088 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
SPG21-214ENST00000561088 CUX2O14529 1486 aa22.6■■□□□ 1.21
SPG21-214ENST00000561088 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
SPG21-214ENST00000561088 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
SPG21-214ENST00000561088 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
SPG21-214ENST00000561088 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
SPG21-214ENST00000561088 CFTRP13569 1480 aa22.38■■□□□ 1.17
SPG21-214ENST00000561088 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
SPG21-214ENST00000561088 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
SPG21-214ENST00000561088 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
SPG21-214ENST00000561088 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SPG21-214ENST00000561088 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
SPG21-214ENST00000561088 WDR62O43379 1518 aa22.26■■□□□ 1.15
SPG21-214ENST00000561088 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
SPG21-214ENST00000561088 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
SPG21-214ENST00000561088 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
SPG21-214ENST00000561088 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
SPG21-214ENST00000561088 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
SPG21-214ENST00000561088 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
SPG21-214ENST00000561088 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
SPG21-214ENST00000561088 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
SPG21-214ENST00000561088 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
SPG21-214ENST00000561088 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
SPG21-214ENST00000561088 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
SPG21-214ENST00000561088 CUX1P39880 1505 aa21.71■■□□□ 1.07
SPG21-214ENST00000561088 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
SPG21-214ENST00000561088 SOGA1O94964 1423 aa21.67■■□□□ 1.06
SPG21-214ENST00000561088 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
SPG21-214ENST00000561088 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
SPG21-214ENST00000561088 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
SPG21-214ENST00000561088 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
SPG21-214ENST00000561088 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
SPG21-214ENST00000561088 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
SPG21-214ENST00000561088 CHD1O14646 1710 aa21.52■■□□□ 1.03
SPG21-214ENST00000561088 FBLN2P98095 1184 aa21.51■■□□□ 1.03
SPG21-214ENST00000561088 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
SPG21-214ENST00000561088 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
SPG21-214ENST00000561088 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
SPG21-214ENST00000561088 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
SPG21-214ENST00000561088 GRIN2BQ13224 1484 aa21.45■■□□□ 1.03
SPG21-214ENST00000561088 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
SPG21-214ENST00000561088 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
SPG21-214ENST00000561088 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
SPG21-214ENST00000561088 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
SPG21-214ENST00000561088 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
SPG21-214ENST00000561088 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
SPG21-214ENST00000561088 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
SPG21-214ENST00000561088 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
SPG21-214ENST00000561088 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
SPG21-214ENST00000561088 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
SPG21-214ENST00000561088 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
SPG21-214ENST00000561088 SYNJ2O15056 1496 aa21.32■■□□□ 1
SPG21-214ENST00000561088 ARHGEF11O15085 1522 aa21.29■■□□□ 1
SPG21-214ENST00000561088 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
SPG21-214ENST00000561088 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
SPG21-214ENST00000561088 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
SPG21-214ENST00000561088 GRIN2AQ12879 1464 aa21.17■□□□□ 0.98
SPG21-214ENST00000561088 FHAD1B1AJZ9 1412 aa21.16■□□□□ 0.98
SPG21-214ENST00000561088 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
SPG21-214ENST00000561088 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
SPG21-214ENST00000561088 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
SPG21-214ENST00000561088 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
SPG21-214ENST00000561088 NUP160Q12769 1436 aa21.04■□□□□ 0.96
SPG21-214ENST00000561088 CUL7Q14999 1698 aa21.02■□□□□ 0.95
SPG21-214ENST00000561088 IGF1RP08069 1367 aa20.97■□□□□ 0.95
SPG21-214ENST00000561088 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
SPG21-214ENST00000561088 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
SPG21-214ENST00000561088 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms