RNA–Protein interactions for RNA: ENST00000561072.1

NIPA2-210, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 4

Gene NIPA2, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-210ENST00000561072 NISCHQ9Y2I1 1504 aa63.02■■■■■ 7.68
NIPA2-210ENST00000561072 CCDC180Q9P1Z9 1646 aa56.15■■■■■ 6.58
NIPA2-210ENST00000561072 ABCC9O60706 1549 aa54.92■■■■■ 6.38
NIPA2-210ENST00000561072 RB1CC1Q8TDY2 1594 aa52.85■■■■■ 6.05
NIPA2-210ENST00000561072 NACADO15069 1562 aa52.76■■■■■ 6.04
NIPA2-210ENST00000561072 ZCCHC6Q5VYS8 1495 aaKnown RBP52.52■■■■■ 6
NIPA2-210ENST00000561072 DCAF8L2P0C7V8 631 aa52.51■■■■■ 6
NIPA2-210ENST00000561072 MYO15BQ96JP2 1530 aa52.45■■■■■ 5.99
NIPA2-210ENST00000561072 DCAF1Q9Y4B6 1507 aa52.19■■■■■ 5.94
NIPA2-210ENST00000561072 UNC13AQ9UPW8 1703 aa51.69■■■■■ 5.87
NIPA2-210ENST00000561072 BICRAQ9NZM4 1560 aa51.28■■■■■ 5.8
NIPA2-210ENST00000561072 PABPN1Q86U42 306 aaKnown RBP eCLIP51.24■■■■■ 5.79
NIPA2-210ENST00000561072 SCRIBQ14160 1630 aa51.16■■■■■ 5.78
NIPA2-210ENST00000561072 SHROOM4Q9ULL8 1493 aa50.76■■■■■ 5.72
NIPA2-210ENST00000561072 DNAJC5BQ9UF47 199 aa50.43■■■■■ 5.66
NIPA2-210ENST00000561072 EIF4G1Q04637 1599 aaKnown RBP49.92■■■■■ 5.58
NIPA2-210ENST00000561072 CC2D2AQ9P2K1 1620 aa49.72■■■■■ 5.55
NIPA2-210ENST00000561072 CECR2Q9BXF3 1484 aa49.37■■■■■ 5.49
NIPA2-210ENST00000561072 SMARCA4P51532 1647 aa48.96■■■■■ 5.43
NIPA2-210ENST00000561072 BAZ1AQ9NRL2 1556 aaPredicted RBP48.87■■■■■ 5.41
NIPA2-210ENST00000561072 ATAD2BQ9ULI0 1458 aa48.67■■■■■ 5.38
NIPA2-210ENST00000561072 NCAPD3P42695 1498 aa48.67■■■■■ 5.38
NIPA2-210ENST00000561072 SMARCA2P51531 1590 aa48.64■■■■■ 5.38
NIPA2-210ENST00000561072 MROH2BQ7Z745 1585 aa48.56■■■■■ 5.36
NIPA2-210ENST00000561072 PEG3Q9GZU2 1588 aa48.51■■■■■ 5.36
NIPA2-210ENST00000561072 HMGXB3Q12766 1538 aa48.48■■■■■ 5.35
NIPA2-210ENST00000561072 BAZ1BQ9UIG0 1483 aaKnown RBP48.27■■■■■ 5.32
NIPA2-210ENST00000561072 WIZO95785 1651 aa48.05■■■■■ 5.28
NIPA2-210ENST00000561072 RSF1Q96T23 1441 aaPredicted RBP47.96■■■■■ 5.27
NIPA2-210ENST00000561072 TOP2AP11388 1531 aaKnown RBP47.56■■■■■ 5.2
NIPA2-210ENST00000561072 NESP48681 1621 aa47.51■■■■■ 5.2
NIPA2-210ENST00000561072 LAMC3Q9Y6N6 1575 aa47.43■■■■■ 5.18
NIPA2-210ENST00000561072 ERCC6Q03468 1493 aa47.35■■■■■ 5.17
NIPA2-210ENST00000561072 CADPSQ9ULU8 1353 aa47.21■■■■■ 5.15
NIPA2-210ENST00000561072 PDS5BQ9NTI5 1447 aa47.05■■■■■ 5.12
NIPA2-210ENST00000561072 KIF21AQ7Z4S6 1674 aa47■■■■■ 5.12
NIPA2-210ENST00000561072 CFTRP13569 1480 aa46.95■■■■■ 5.11
NIPA2-210ENST00000561072 CCDC88BA6NC98 1476 aa46.94■■■■■ 5.1
NIPA2-210ENST00000561072 CUX2O14529 1486 aa46.94■■■■■ 5.1
NIPA2-210ENST00000561072 THOC2Q8NI27 1593 aaKnown RBP46.9■■■■■ 5.1
NIPA2-210ENST00000561072 FANCD2Q9BXW9 1451 aa46.7■■■■■ 5.07
NIPA2-210ENST00000561072 CEP164Q9UPV0 1460 aa46.67■■■■■ 5.06
NIPA2-210ENST00000561072 PRDM2Q13029 1718 aa46.67■■■■■ 5.06
NIPA2-210ENST00000561072 MRC2Q9UBG0 1479 aa46.62■■■■■ 5.05
NIPA2-210ENST00000561072 SUPT5HO00267 1087 aaKnown RBP46.54■■■■■ 5.04
NIPA2-210ENST00000561072 WDR62O43379 1518 aa46.5■■■■■ 5.03
NIPA2-210ENST00000561072 URB2Q14146 1524 aaKnown RBP46.25■■■■■ 4.99
NIPA2-210ENST00000561072 TOPBP1Q92547 1522 aa45.95■■■■■ 4.95
NIPA2-210ENST00000561072 ABCC8Q09428 1581 aa45.92■■■■■ 4.94
NIPA2-210ENST00000561072 DNMBPQ6XZF7 1577 aa45.92■■■■■ 4.94
NIPA2-210ENST00000561072 IFT140Q96RY7 1462 aa45.68■■■■■ 4.9
NIPA2-210ENST00000561072 CUX1P39880 1505 aa45.58■■■■■ 4.89
NIPA2-210ENST00000561072 POLA1P09884 1462 aaPredicted RBP45.56■■■■■ 4.88
NIPA2-210ENST00000561072 DNAJC5Q9H3Z4 198 aa45.5■■■■■ 4.87
NIPA2-210ENST00000561072 TARBP1Q13395 1621 aaKnown RBP45.49■■■■■ 4.87
NIPA2-210ENST00000561072 ZNF608Q9ULD9 1512 aaPredicted RBP45.47■■■■■ 4.87
NIPA2-210ENST00000561072 FGD5Q6ZNL6 1462 aa45.42■■■■■ 4.86
NIPA2-210ENST00000561072 EIF4G3O43432 1585 aaKnown RBP45.36■■■■■ 4.85
NIPA2-210ENST00000561072 RAD54L2Q9Y4B4 1467 aa45.32■■■■■ 4.85
NIPA2-210ENST00000561072 SOGA1O94964 1423 aa45.31■■■■■ 4.84
NIPA2-210ENST00000561072 WRNQ14191 1432 aaPredicted RBP eCLIP45.22■■■■■ 4.83
NIPA2-210ENST00000561072 BIVM-ERCC5R4GMW8 1640 aa45.19■■■■■ 4.83
NIPA2-210ENST00000561072 TOP2BQ02880 1626 aa45.18■■■■■ 4.82
NIPA2-210ENST00000561072 AQRO60306 1485 aaKnown RBP eCLIP45.17■■■■■ 4.82
NIPA2-210ENST00000561072 SYNJ1O43426 1573 aa45.16■■■■■ 4.82
NIPA2-210ENST00000561072 WDR97A6NE52 1622 aa45.16■■■■■ 4.82
NIPA2-210ENST00000561072 TDRD9Q8NDG6 1382 aaKnown RBP45.06■■■■■ 4.8
NIPA2-210ENST00000561072 ABCA10Q8WWZ4 1543 aa44.99■■■■■ 4.79
NIPA2-210ENST00000561072 ABCA5Q8WWZ7 1642 aa44.87■■■■■ 4.77
NIPA2-210ENST00000561072 OSCARQ8IYS5 282 aa44.86■■■■■ 4.77
NIPA2-210ENST00000561072 GRIN2BQ13224 1484 aa44.84■■■■■ 4.77
NIPA2-210ENST00000561072 GAPVD1Q14C86 1478 aa44.83■■■■■ 4.77
NIPA2-210ENST00000561072 PBRM1Q86U86 1689 aa44.8■■■■■ 4.76
NIPA2-210ENST00000561072 SNAPC4Q5SXM2 1469 aa44.8■■■■■ 4.76
NIPA2-210ENST00000561072 CHD1O14646 1710 aa44.78■■■■■ 4.76
NIPA2-210ENST00000561072 MAGI1Q96QZ7 1491 aaPredicted RBP44.75■■■■■ 4.75
NIPA2-210ENST00000561072 FBLN2P98095 1184 aa44.57■■■■■ 4.73
NIPA2-210ENST00000561072 SYNJ2O15056 1496 aa44.57■■■■■ 4.73
NIPA2-210ENST00000561072 ERICH3Q5RHP9 1530 aa44.47■■■■■ 4.71
NIPA2-210ENST00000561072 CHMP7Q8WUX9 453 aaPredicted RBP44.46■■■■■ 4.71
NIPA2-210ENST00000561072 ADAMTS12P58397 1594 aa44.44■■■■■ 4.71
NIPA2-210ENST00000561072 CLASP1Q7Z460 1538 aa44.31■■■■■ 4.68
NIPA2-210ENST00000561072 FHAD1B1AJZ9 1412 aa44.3■■■■■ 4.68
NIPA2-210ENST00000561072 GRIN2AQ12879 1464 aa44.28■■■■■ 4.68
NIPA2-210ENST00000561072 KIF27Q86VH2 1401 aa44.27■■■■■ 4.68
NIPA2-210ENST00000561072 RIMBP3CA6NJZ7 1639 aa44.26■■■■■ 4.68
NIPA2-210ENST00000561072 RIMBP3BA6NNM3 1639 aa44.26■■■■■ 4.68
NIPA2-210ENST00000561072 RIMBP3Q9UFD9 1639 aa44.26■■■■■ 4.68
NIPA2-210ENST00000561072 ARHGEF11O15085 1522 aa44.24■■■■■ 4.67
NIPA2-210ENST00000561072 NUP160Q12769 1436 aa44.09■■■■■ 4.65
NIPA2-210ENST00000561072 CEP170Q5SW79 1584 aa44.08■■■■■ 4.65
NIPA2-210ENST00000561072 IGF1RP08069 1367 aa44.07■■■■■ 4.65
NIPA2-210ENST00000561072 CUL7Q14999 1698 aa44.07■■■■■ 4.64
NIPA2-210ENST00000561072 TRIM41Q8WV44 630 aa43.98■■■■■ 4.63
NIPA2-210ENST00000561072 ARAP1Q96P48 1450 aa43.88■■■■■ 4.61
NIPA2-210ENST00000561072 RUSC2Q8N2Y8 1516 aa43.83■■■■■ 4.61
NIPA2-210ENST00000561072 CARMIL1Q5VZK9 1371 aa43.81■■■■■ 4.6
NIPA2-210ENST00000561072 SHROOM2Q13796 1616 aa43.81■■■■■ 4.6
NIPA2-210ENST00000561072 CYB5RLQ6IPT4 315 aa43.71■■■■■ 4.59
NIPA2-210ENST00000561072 ERCC6L2Q5T890 1561 aa43.66■■■■■ 4.58
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms