RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
PSME1-208ENST00000561059 ABCC9O60706 1549 aa30.17■■■□□ 2.42
PSME1-208ENST00000561059 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
PSME1-208ENST00000561059 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
PSME1-208ENST00000561059 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
PSME1-208ENST00000561059 NACADO15069 1562 aa28.36■■■□□ 2.13
PSME1-208ENST00000561059 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
PSME1-208ENST00000561059 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
PSME1-208ENST00000561059 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
PSME1-208ENST00000561059 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
PSME1-208ENST00000561059 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
PSME1-208ENST00000561059 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
PSME1-208ENST00000561059 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
PSME1-208ENST00000561059 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
PSME1-208ENST00000561059 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
PSME1-208ENST00000561059 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
PSME1-208ENST00000561059 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
PSME1-208ENST00000561059 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
PSME1-208ENST00000561059 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
PSME1-208ENST00000561059 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
PSME1-208ENST00000561059 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
PSME1-208ENST00000561059 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
PSME1-208ENST00000561059 ERCC6Q03468 1493 aa26.01■■□□□ 1.75
PSME1-208ENST00000561059 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
PSME1-208ENST00000561059 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
PSME1-208ENST00000561059 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
PSME1-208ENST00000561059 NESP48681 1621 aa25.93■■□□□ 1.74
PSME1-208ENST00000561059 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
PSME1-208ENST00000561059 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
PSME1-208ENST00000561059 CUX2O14529 1486 aa25.85■■□□□ 1.73
PSME1-208ENST00000561059 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
PSME1-208ENST00000561059 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
PSME1-208ENST00000561059 WIZO95785 1651 aa25.57■■□□□ 1.68
PSME1-208ENST00000561059 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
PSME1-208ENST00000561059 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
PSME1-208ENST00000561059 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
PSME1-208ENST00000561059 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
PSME1-208ENST00000561059 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
PSME1-208ENST00000561059 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
PSME1-208ENST00000561059 WDR62O43379 1518 aa25.2■■□□□ 1.62
PSME1-208ENST00000561059 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
PSME1-208ENST00000561059 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
PSME1-208ENST00000561059 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
PSME1-208ENST00000561059 CFTRP13569 1480 aa25.15■■□□□ 1.62
PSME1-208ENST00000561059 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PSME1-208ENST00000561059 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
PSME1-208ENST00000561059 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
PSME1-208ENST00000561059 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
PSME1-208ENST00000561059 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
PSME1-208ENST00000561059 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
PSME1-208ENST00000561059 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
PSME1-208ENST00000561059 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
PSME1-208ENST00000561059 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
PSME1-208ENST00000561059 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
PSME1-208ENST00000561059 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
PSME1-208ENST00000561059 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.512e-8■■■■■ 27.5
PSME1-208ENST00000561059 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
PSME1-208ENST00000561059 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
PSME1-208ENST00000561059 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
PSME1-208ENST00000561059 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PSME1-208ENST00000561059 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
PSME1-208ENST00000561059 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PSME1-208ENST00000561059 FBLN2P98095 1184 aa24.4■■□□□ 1.5
PSME1-208ENST00000561059 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
PSME1-208ENST00000561059 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
PSME1-208ENST00000561059 SOGA1O94964 1423 aa24.36■■□□□ 1.49
PSME1-208ENST00000561059 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
PSME1-208ENST00000561059 CHD1O14646 1710 aa24.32■■□□□ 1.48
PSME1-208ENST00000561059 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
PSME1-208ENST00000561059 CUX1P39880 1505 aa24.31■■□□□ 1.48
PSME1-208ENST00000561059 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
PSME1-208ENST00000561059 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
PSME1-208ENST00000561059 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
PSME1-208ENST00000561059 ARAP1Q96P48 1450 aa24.14■■□□□ 1.46
PSME1-208ENST00000561059 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
PSME1-208ENST00000561059 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PSME1-208ENST00000561059 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
PSME1-208ENST00000561059 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
PSME1-208ENST00000561059 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
PSME1-208ENST00000561059 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
PSME1-208ENST00000561059 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
PSME1-208ENST00000561059 PBRM1Q86U86 1689 aa24■■□□□ 1.43
PSME1-208ENST00000561059 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
PSME1-208ENST00000561059 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
PSME1-208ENST00000561059 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
PSME1-208ENST00000561059 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
PSME1-208ENST00000561059 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
PSME1-208ENST00000561059 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
PSME1-208ENST00000561059 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
PSME1-208ENST00000561059 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
PSME1-208ENST00000561059 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
PSME1-208ENST00000561059 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
PSME1-208ENST00000561059 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PSME1-208ENST00000561059 NUP160Q12769 1436 aa23.72■■□□□ 1.39
PSME1-208ENST00000561059 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
PSME1-208ENST00000561059 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
PSME1-208ENST00000561059 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
PSME1-208ENST00000561059 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
PSME1-208ENST00000561059 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
PSME1-208ENST00000561059 IGF1RP08069 1367 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms