RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
CSHL1-210ENST00000561003 ABCC9O60706 1549 aa23.24■■□□□ 1.31
CSHL1-210ENST00000561003 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
CSHL1-210ENST00000561003 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
CSHL1-210ENST00000561003 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
CSHL1-210ENST00000561003 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
CSHL1-210ENST00000561003 NACADO15069 1562 aa21.9■■□□□ 1.1
CSHL1-210ENST00000561003 PABPN1Q86U42 306 aaKnown RBP eCLIP21.76■■□□□ 1.07
CSHL1-210ENST00000561003 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
CSHL1-210ENST00000561003 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
CSHL1-210ENST00000561003 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
CSHL1-210ENST00000561003 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
CSHL1-210ENST00000561003 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
CSHL1-210ENST00000561003 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.98
CSHL1-210ENST00000561003 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
CSHL1-210ENST00000561003 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
CSHL1-210ENST00000561003 SCRIBQ14160 1630 aa20.87■□□□□ 0.93
CSHL1-210ENST00000561003 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
CSHL1-210ENST00000561003 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
CSHL1-210ENST00000561003 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
CSHL1-210ENST00000561003 CUX2O14529 1486 aa20.18■□□□□ 0.82
CSHL1-210ENST00000561003 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
CSHL1-210ENST00000561003 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
CSHL1-210ENST00000561003 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
CSHL1-210ENST00000561003 HMGXB3Q12766 1538 aa19.98■□□□□ 0.79
CSHL1-210ENST00000561003 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
CSHL1-210ENST00000561003 BAZ1AQ9NRL2 1556 aaPredicted RBP19.92■□□□□ 0.78
CSHL1-210ENST00000561003 SMARCA4P51532 1647 aa19.92■□□□□ 0.78
CSHL1-210ENST00000561003 NESP48681 1621 aa19.86■□□□□ 0.77
CSHL1-210ENST00000561003 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.76
CSHL1-210ENST00000561003 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
CSHL1-210ENST00000561003 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
CSHL1-210ENST00000561003 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
CSHL1-210ENST00000561003 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
CSHL1-210ENST00000561003 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
CSHL1-210ENST00000561003 MRC2Q9UBG0 1479 aa19.52■□□□□ 0.72
CSHL1-210ENST00000561003 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
CSHL1-210ENST00000561003 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
CSHL1-210ENST00000561003 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
CSHL1-210ENST00000561003 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
CSHL1-210ENST00000561003 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
CSHL1-210ENST00000561003 WDR62O43379 1518 aa19.39■□□□□ 0.69
CSHL1-210ENST00000561003 CFTRP13569 1480 aa19.36■□□□□ 0.69
CSHL1-210ENST00000561003 WIZO95785 1651 aa19.34■□□□□ 0.69
CSHL1-210ENST00000561003 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
CSHL1-210ENST00000561003 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
CSHL1-210ENST00000561003 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
CSHL1-210ENST00000561003 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
CSHL1-210ENST00000561003 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
CSHL1-210ENST00000561003 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
CSHL1-210ENST00000561003 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
CSHL1-210ENST00000561003 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
CSHL1-210ENST00000561003 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
CSHL1-210ENST00000561003 FBLN2P98095 1184 aa18.93■□□□□ 0.62
CSHL1-210ENST00000561003 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.61
CSHL1-210ENST00000561003 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
CSHL1-210ENST00000561003 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
CSHL1-210ENST00000561003 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
CSHL1-210ENST00000561003 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
CSHL1-210ENST00000561003 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
CSHL1-210ENST00000561003 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
CSHL1-210ENST00000561003 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
CSHL1-210ENST00000561003 SOGA1O94964 1423 aa18.8■□□□□ 0.6
CSHL1-210ENST00000561003 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
CSHL1-210ENST00000561003 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
CSHL1-210ENST00000561003 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
CSHL1-210ENST00000561003 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
CSHL1-210ENST00000561003 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
CSHL1-210ENST00000561003 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
CSHL1-210ENST00000561003 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
CSHL1-210ENST00000561003 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
CSHL1-210ENST00000561003 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
CSHL1-210ENST00000561003 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
CSHL1-210ENST00000561003 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
CSHL1-210ENST00000561003 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
CSHL1-210ENST00000561003 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
CSHL1-210ENST00000561003 CHD1O14646 1710 aa18.53■□□□□ 0.56
CSHL1-210ENST00000561003 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
CSHL1-210ENST00000561003 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
CSHL1-210ENST00000561003 CUX1P39880 1505 aa18.5■□□□□ 0.55
CSHL1-210ENST00000561003 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
CSHL1-210ENST00000561003 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
CSHL1-210ENST00000561003 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
CSHL1-210ENST00000561003 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
CSHL1-210ENST00000561003 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
CSHL1-210ENST00000561003 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
CSHL1-210ENST00000561003 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
CSHL1-210ENST00000561003 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
CSHL1-210ENST00000561003 NUP160Q12769 1436 aa18.27■□□□□ 0.52
CSHL1-210ENST00000561003 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
CSHL1-210ENST00000561003 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
CSHL1-210ENST00000561003 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
CSHL1-210ENST00000561003 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
CSHL1-210ENST00000561003 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
CSHL1-210ENST00000561003 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
CSHL1-210ENST00000561003 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
CSHL1-210ENST00000561003 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
CSHL1-210ENST00000561003 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
CSHL1-210ENST00000561003 ERCC6L2Q5T890 1561 aa18.1■□□□□ 0.49
CSHL1-210ENST00000561003 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms