RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
USP8-215ENST00000560982 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
USP8-215ENST00000560982 ABCC9O60706 1549 aa31.19■■■□□ 2.58
USP8-215ENST00000560982 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
USP8-215ENST00000560982 NACADO15069 1562 aa29.56■■■□□ 2.32
USP8-215ENST00000560982 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
USP8-215ENST00000560982 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
USP8-215ENST00000560982 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
USP8-215ENST00000560982 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
USP8-215ENST00000560982 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
USP8-215ENST00000560982 ZCCHC6Q5VYS8 1495 aaKnown RBP28.96■■■□□ 2.23
USP8-215ENST00000560982 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
USP8-215ENST00000560982 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
USP8-215ENST00000560982 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
USP8-215ENST00000560982 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
USP8-215ENST00000560982 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
USP8-215ENST00000560982 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
USP8-215ENST00000560982 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
USP8-215ENST00000560982 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
USP8-215ENST00000560982 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
USP8-215ENST00000560982 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
USP8-215ENST00000560982 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
USP8-215ENST00000560982 BAZ1AQ9NRL2 1556 aaPredicted RBP27.11■■□□□ 1.93
USP8-215ENST00000560982 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
USP8-215ENST00000560982 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
USP8-215ENST00000560982 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
USP8-215ENST00000560982 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
USP8-215ENST00000560982 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
USP8-215ENST00000560982 CUX2O14529 1486 aa26.84■■□□□ 1.89
USP8-215ENST00000560982 NESP48681 1621 aa26.83■■□□□ 1.88
USP8-215ENST00000560982 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
USP8-215ENST00000560982 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
USP8-215ENST00000560982 WIZO95785 1651 aa26.61■■□□□ 1.85
USP8-215ENST00000560982 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
USP8-215ENST00000560982 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
USP8-215ENST00000560982 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
USP8-215ENST00000560982 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
USP8-215ENST00000560982 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
USP8-215ENST00000560982 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
USP8-215ENST00000560982 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
USP8-215ENST00000560982 WDR62O43379 1518 aa26.2■■□□□ 1.79
USP8-215ENST00000560982 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
USP8-215ENST00000560982 CFTRP13569 1480 aa26.17■■□□□ 1.78
USP8-215ENST00000560982 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
USP8-215ENST00000560982 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
USP8-215ENST00000560982 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
USP8-215ENST00000560982 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
USP8-215ENST00000560982 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
USP8-215ENST00000560982 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
USP8-215ENST00000560982 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
USP8-215ENST00000560982 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
USP8-215ENST00000560982 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
USP8-215ENST00000560982 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
USP8-215ENST00000560982 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
USP8-215ENST00000560982 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
USP8-215ENST00000560982 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.67
USP8-215ENST00000560982 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
USP8-215ENST00000560982 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.655e-9■■□□□ 13.1
USP8-215ENST00000560982 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
USP8-215ENST00000560982 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
USP8-215ENST00000560982 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
USP8-215ENST00000560982 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
USP8-215ENST00000560982 SOGA1O94964 1423 aa25.3■■□□□ 1.64
USP8-215ENST00000560982 CHD1O14646 1710 aa25.3■■□□□ 1.64
USP8-215ENST00000560982 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
USP8-215ENST00000560982 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
USP8-215ENST00000560982 CUX1P39880 1505 aa25.27■■□□□ 1.64
USP8-215ENST00000560982 ARHGEF11O15085 1522 aa25.23■■□□□ 1.63
USP8-215ENST00000560982 TDRD9Q8NDG6 1382 aaKnown RBP25.23■■□□□ 1.63
USP8-215ENST00000560982 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
USP8-215ENST00000560982 FBLN2P98095 1184 aa25.19■■□□□ 1.62
USP8-215ENST00000560982 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.61
USP8-215ENST00000560982 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
USP8-215ENST00000560982 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
USP8-215ENST00000560982 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
USP8-215ENST00000560982 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
USP8-215ENST00000560982 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
USP8-215ENST00000560982 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
USP8-215ENST00000560982 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
USP8-215ENST00000560982 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
USP8-215ENST00000560982 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
USP8-215ENST00000560982 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
USP8-215ENST00000560982 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
USP8-215ENST00000560982 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
USP8-215ENST00000560982 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
USP8-215ENST00000560982 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
USP8-215ENST00000560982 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
USP8-215ENST00000560982 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
USP8-215ENST00000560982 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
USP8-215ENST00000560982 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
USP8-215ENST00000560982 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.54
USP8-215ENST00000560982 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
USP8-215ENST00000560982 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
USP8-215ENST00000560982 NUP160Q12769 1436 aa24.66■■□□□ 1.54
USP8-215ENST00000560982 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
USP8-215ENST00000560982 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
USP8-215ENST00000560982 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
USP8-215ENST00000560982 PRG4Q92954 1404 aaPredicted RBP24.42■■□□□ 1.5
USP8-215ENST00000560982 KIF27Q86VH2 1401 aa24.41■■□□□ 1.5
USP8-215ENST00000560982 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms