RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 NISCHQ9Y2I1 1504 aa47.3■■■■■ 5.16
TRIP4-211ENST00000560920 ABCC9O60706 1549 aa42.94■■■■■ 4.46
TRIP4-211ENST00000560920 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
TRIP4-211ENST00000560920 DNAJC5BQ9UF47 199 aa40.7■■■■■ 4.11
TRIP4-211ENST00000560920 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
TRIP4-211ENST00000560920 NACADO15069 1562 aa40.32■■■■■ 4.05
TRIP4-211ENST00000560920 DCAF8L2P0C7V8 631 aa40.11■■■■■ 4.01
TRIP4-211ENST00000560920 PABPN1Q86U42 306 aaKnown RBP eCLIP39.98■■■■□ 3.99
TRIP4-211ENST00000560920 UNC13AQ9UPW8 1703 aa39.76■■■■□ 3.96
TRIP4-211ENST00000560920 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
TRIP4-211ENST00000560920 BICRAQ9NZM4 1560 aa39.56■■■■□ 3.92
TRIP4-211ENST00000560920 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
TRIP4-211ENST00000560920 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
TRIP4-211ENST00000560920 SHROOM4Q9ULL8 1493 aa38.91■■■■□ 3.82
TRIP4-211ENST00000560920 SCRIBQ14160 1630 aa38.75■■■■□ 3.79
TRIP4-211ENST00000560920 CC2D2AQ9P2K1 1620 aa38.75■■■■□ 3.79
TRIP4-211ENST00000560920 CECR2Q9BXF3 1484 aa38.71■■■■□ 3.79
TRIP4-211ENST00000560920 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
TRIP4-211ENST00000560920 DNAJC5Q9H3Z4 198 aa37.58■■■■□ 3.61
TRIP4-211ENST00000560920 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
TRIP4-211ENST00000560920 CUX2O14529 1486 aa37.11■■■■□ 3.53
TRIP4-211ENST00000560920 ATAD2BQ9ULI0 1458 aa37.11■■■■□ 3.53
TRIP4-211ENST00000560920 ERCC6Q03468 1493 aa37.05■■■■□ 3.52
TRIP4-211ENST00000560920 SMARCA4P51532 1647 aa36.95■■■■□ 3.51
TRIP4-211ENST00000560920 SMARCA2P51531 1590 aa36.94■■■■□ 3.5
TRIP4-211ENST00000560920 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
TRIP4-211ENST00000560920 NESP48681 1621 aa36.81■■■■□ 3.48
TRIP4-211ENST00000560920 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.47
TRIP4-211ENST00000560920 BAZ1BQ9UIG0 1483 aaKnown RBP36.69■■■■□ 3.46
TRIP4-211ENST00000560920 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
TRIP4-211ENST00000560920 MROH2BQ7Z745 1585 aa36.46■■■■□ 3.43
TRIP4-211ENST00000560920 THOC2Q8NI27 1593 aaKnown RBP36.44■■■■□ 3.42
TRIP4-211ENST00000560920 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
TRIP4-211ENST00000560920 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.4
TRIP4-211ENST00000560920 PDS5BQ9NTI5 1447 aa36.25■■■■□ 3.39
TRIP4-211ENST00000560920 CADPSQ9ULU8 1353 aa36.13■■■■□ 3.37
TRIP4-211ENST00000560920 WIZO95785 1651 aa35.99■■■■□ 3.35
TRIP4-211ENST00000560920 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
TRIP4-211ENST00000560920 WDR62O43379 1518 aa35.88■■■■□ 3.33
TRIP4-211ENST00000560920 TRIM41Q8WV44 630 aa35.75■■■■□ 3.31
TRIP4-211ENST00000560920 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
TRIP4-211ENST00000560920 FANCD2Q9BXW9 1451 aa35.69■■■■□ 3.3
TRIP4-211ENST00000560920 CFTRP13569 1480 aa35.64■■■■□ 3.3
TRIP4-211ENST00000560920 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
TRIP4-211ENST00000560920 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
TRIP4-211ENST00000560920 URB2Q14146 1524 aaKnown RBP35.44■■■■□ 3.26
TRIP4-211ENST00000560920 OSCARQ8IYS5 282 aa35.43■■■■□ 3.26
TRIP4-211ENST00000560920 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
TRIP4-211ENST00000560920 CCDC88BA6NC98 1476 aa35.14■■■■□ 3.22
TRIP4-211ENST00000560920 ZNF608Q9ULD9 1512 aaPredicted RBP35.07■■■■□ 3.21
TRIP4-211ENST00000560920 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
TRIP4-211ENST00000560920 TOPBP1Q92547 1522 aa34.99■■■■□ 3.19
TRIP4-211ENST00000560920 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.18
TRIP4-211ENST00000560920 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.18
TRIP4-211ENST00000560920 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.18
TRIP4-211ENST00000560920 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
TRIP4-211ENST00000560920 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
TRIP4-211ENST00000560920 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
TRIP4-211ENST00000560920 DNMBPQ6XZF7 1577 aa34.79■■■■□ 3.16
TRIP4-211ENST00000560920 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.151e-6■□□□□ 11
TRIP4-211ENST00000560920 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
TRIP4-211ENST00000560920 CYB5RLQ6IPT4 315 aa34.64■■■■□ 3.14
TRIP4-211ENST00000560920 POLA1P09884 1462 aaPredicted RBP34.61■■■■□ 3.13
TRIP4-211ENST00000560920 CHD1O14646 1710 aa34.6■■■■□ 3.13
TRIP4-211ENST00000560920 FBLN2P98095 1184 aa34.54■■■■□ 3.12
TRIP4-211ENST00000560920 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
TRIP4-211ENST00000560920 SOGA1O94964 1423 aa34.47■■■■□ 3.11
TRIP4-211ENST00000560920 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
TRIP4-211ENST00000560920 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
TRIP4-211ENST00000560920 FGD5Q6ZNL6 1462 aa34.33■■■■□ 3.09
TRIP4-211ENST00000560920 TRHP20396 242 aaPredicted RBP34.33■■■■□ 3.09
TRIP4-211ENST00000560920 SNAPC4Q5SXM2 1469 aa34.31■■■■□ 3.08
TRIP4-211ENST00000560920 CUX1P39880 1505 aa34.27■■■■□ 3.08
TRIP4-211ENST00000560920 WDR97A6NE52 1622 aa34.26■■■■□ 3.07
TRIP4-211ENST00000560920 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
TRIP4-211ENST00000560920 CLASP1Q7Z460 1538 aa34.23■■■■□ 3.07
TRIP4-211ENST00000560920 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
TRIP4-211ENST00000560920 GRIN2BQ13224 1484 aa34.17■■■■□ 3.06
TRIP4-211ENST00000560920 SYNJ1O43426 1573 aa34.14■■■■□ 3.06
TRIP4-211ENST00000560920 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
TRIP4-211ENST00000560920 GAPVD1Q14C86 1478 aa34.01■■■■□ 3.04
TRIP4-211ENST00000560920 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
TRIP4-211ENST00000560920 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
TRIP4-211ENST00000560920 ABCA5Q8WWZ7 1642 aa33.89■■■■□ 3.02
TRIP4-211ENST00000560920 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
TRIP4-211ENST00000560920 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
TRIP4-211ENST00000560920 WRNQ14191 1432 aaPredicted RBP eCLIP33.72■■■□□ 2.99
TRIP4-211ENST00000560920 ERCC6L2Q5T890 1561 aa33.71■■■□□ 2.99
TRIP4-211ENST00000560920 NUP160Q12769 1436 aa33.65■■■□□ 2.98
TRIP4-211ENST00000560920 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
TRIP4-211ENST00000560920 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
TRIP4-211ENST00000560920 TOP2BQ02880 1626 aa33.59■■■□□ 2.97
TRIP4-211ENST00000560920 BIVM-ERCC5R4GMW8 1640 aa33.58■■■□□ 2.97
TRIP4-211ENST00000560920 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
TRIP4-211ENST00000560920 AEBP2Q6ZN18 517 aaPredicted RBP33.55■■■□□ 2.96
TRIP4-211ENST00000560920 SHROOM2Q13796 1616 aa33.52■■■□□ 2.96
TRIP4-211ENST00000560920 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
TRIP4-211ENST00000560920 PRG4Q92954 1404 aaPredicted RBP33.36■■■□□ 2.93
TRIP4-211ENST00000560920 JPH4Q96JJ6 628 aa33.35■■■□□ 2.93
TRIP4-211ENST00000560920 KIF13AQ9H1H9 1805 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms