RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
CPNE6-219ENST00000560884 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
CPNE6-219ENST00000560884 ABCC9O60706 1549 aa28.35■■■□□ 2.13
CPNE6-219ENST00000560884 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
CPNE6-219ENST00000560884 NACADO15069 1562 aa27.21■■□□□ 1.95
CPNE6-219ENST00000560884 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
CPNE6-219ENST00000560884 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
CPNE6-219ENST00000560884 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
CPNE6-219ENST00000560884 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
CPNE6-219ENST00000560884 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
CPNE6-219ENST00000560884 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
CPNE6-219ENST00000560884 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
CPNE6-219ENST00000560884 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
CPNE6-219ENST00000560884 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
CPNE6-219ENST00000560884 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
CPNE6-219ENST00000560884 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
CPNE6-219ENST00000560884 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
CPNE6-219ENST00000560884 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
CPNE6-219ENST00000560884 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
CPNE6-219ENST00000560884 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
CPNE6-219ENST00000560884 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
CPNE6-219ENST00000560884 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.6
CPNE6-219ENST00000560884 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
CPNE6-219ENST00000560884 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
CPNE6-219ENST00000560884 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
CPNE6-219ENST00000560884 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
CPNE6-219ENST00000560884 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
CPNE6-219ENST00000560884 WIZO95785 1651 aa24.78■■□□□ 1.56
CPNE6-219ENST00000560884 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
CPNE6-219ENST00000560884 NESP48681 1621 aa24.53■■□□□ 1.52
CPNE6-219ENST00000560884 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
CPNE6-219ENST00000560884 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
CPNE6-219ENST00000560884 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
CPNE6-219ENST00000560884 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
CPNE6-219ENST00000560884 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
CPNE6-219ENST00000560884 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
CPNE6-219ENST00000560884 CUX2O14529 1486 aa24.26■■□□□ 1.47
CPNE6-219ENST00000560884 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
CPNE6-219ENST00000560884 CFTRP13569 1480 aa24.19■■□□□ 1.46
CPNE6-219ENST00000560884 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
CPNE6-219ENST00000560884 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
CPNE6-219ENST00000560884 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
CPNE6-219ENST00000560884 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
CPNE6-219ENST00000560884 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
CPNE6-219ENST00000560884 WDR62O43379 1518 aa24.02■■□□□ 1.44
CPNE6-219ENST00000560884 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
CPNE6-219ENST00000560884 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
CPNE6-219ENST00000560884 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
CPNE6-219ENST00000560884 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
CPNE6-219ENST00000560884 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
CPNE6-219ENST00000560884 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
CPNE6-219ENST00000560884 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
CPNE6-219ENST00000560884 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
CPNE6-219ENST00000560884 CUX1P39880 1505 aa23.49■■□□□ 1.35
CPNE6-219ENST00000560884 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
CPNE6-219ENST00000560884 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
CPNE6-219ENST00000560884 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
CPNE6-219ENST00000560884 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
CPNE6-219ENST00000560884 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
CPNE6-219ENST00000560884 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
CPNE6-219ENST00000560884 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
CPNE6-219ENST00000560884 SOGA1O94964 1423 aa23.29■■□□□ 1.32
CPNE6-219ENST00000560884 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
CPNE6-219ENST00000560884 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
CPNE6-219ENST00000560884 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
CPNE6-219ENST00000560884 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
CPNE6-219ENST00000560884 CHD1O14646 1710 aa23.19■■□□□ 1.3
CPNE6-219ENST00000560884 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
CPNE6-219ENST00000560884 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
CPNE6-219ENST00000560884 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
CPNE6-219ENST00000560884 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
CPNE6-219ENST00000560884 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
CPNE6-219ENST00000560884 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
CPNE6-219ENST00000560884 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
CPNE6-219ENST00000560884 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
CPNE6-219ENST00000560884 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
CPNE6-219ENST00000560884 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
CPNE6-219ENST00000560884 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
CPNE6-219ENST00000560884 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
CPNE6-219ENST00000560884 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
CPNE6-219ENST00000560884 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
CPNE6-219ENST00000560884 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
CPNE6-219ENST00000560884 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
CPNE6-219ENST00000560884 FBLN2P98095 1184 aa22.88■■□□□ 1.25
CPNE6-219ENST00000560884 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CPNE6-219ENST00000560884 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
CPNE6-219ENST00000560884 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
CPNE6-219ENST00000560884 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
CPNE6-219ENST00000560884 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
CPNE6-219ENST00000560884 NUP160Q12769 1436 aa22.73■■□□□ 1.23
CPNE6-219ENST00000560884 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
CPNE6-219ENST00000560884 CUL7Q14999 1698 aa22.71■■□□□ 1.23
CPNE6-219ENST00000560884 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
CPNE6-219ENST00000560884 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
CPNE6-219ENST00000560884 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
CPNE6-219ENST00000560884 IGF1RP08069 1367 aa22.63■■□□□ 1.21
CPNE6-219ENST00000560884 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
CPNE6-219ENST00000560884 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
CPNE6-219ENST00000560884 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
CPNE6-219ENST00000560884 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms