RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 NISCHQ9Y2I1 1504 aa41.83■■■■■ 4.29
CPNE6-217ENST00000560828 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
CPNE6-217ENST00000560828 ABCC9O60706 1549 aa37.08■■■■□ 3.53
CPNE6-217ENST00000560828 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
CPNE6-217ENST00000560828 NACADO15069 1562 aa35.31■■■■□ 3.24
CPNE6-217ENST00000560828 DCAF8L2P0C7V8 631 aa35.1■■■■□ 3.21
CPNE6-217ENST00000560828 MYO15BQ96JP2 1530 aa34.98■■■■□ 3.19
CPNE6-217ENST00000560828 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
CPNE6-217ENST00000560828 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
CPNE6-217ENST00000560828 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
CPNE6-217ENST00000560828 DCAF1Q9Y4B6 1507 aa34.62■■■■□ 3.13
CPNE6-217ENST00000560828 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
CPNE6-217ENST00000560828 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
CPNE6-217ENST00000560828 SHROOM4Q9ULL8 1493 aa34.08■■■■□ 3.05
CPNE6-217ENST00000560828 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
CPNE6-217ENST00000560828 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
CPNE6-217ENST00000560828 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
CPNE6-217ENST00000560828 CECR2Q9BXF3 1484 aa33.41■■■□□ 2.94
CPNE6-217ENST00000560828 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
CPNE6-217ENST00000560828 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
CPNE6-217ENST00000560828 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
CPNE6-217ENST00000560828 SMARCA2P51531 1590 aa32.47■■■□□ 2.79
CPNE6-217ENST00000560828 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
CPNE6-217ENST00000560828 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
CPNE6-217ENST00000560828 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
CPNE6-217ENST00000560828 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
CPNE6-217ENST00000560828 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
CPNE6-217ENST00000560828 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
CPNE6-217ENST00000560828 CUX2O14529 1486 aa32.05■■■□□ 2.72
CPNE6-217ENST00000560828 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
CPNE6-217ENST00000560828 NESP48681 1621 aa31.93■■■□□ 2.7
CPNE6-217ENST00000560828 LAMC3Q9Y6N6 1575 aa31.81■■■□□ 2.68
CPNE6-217ENST00000560828 WIZO95785 1651 aa31.79■■■□□ 2.68
CPNE6-217ENST00000560828 RSF1Q96T23 1441 aaPredicted RBP31.67■■■□□ 2.66
CPNE6-217ENST00000560828 PDS5BQ9NTI5 1447 aa31.64■■■□□ 2.66
CPNE6-217ENST00000560828 THOC2Q8NI27 1593 aaKnown RBP31.63■■■□□ 2.65
CPNE6-217ENST00000560828 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CPNE6-217ENST00000560828 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
CPNE6-217ENST00000560828 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
CPNE6-217ENST00000560828 CFTRP13569 1480 aa31.33■■■□□ 2.61
CPNE6-217ENST00000560828 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
CPNE6-217ENST00000560828 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
CPNE6-217ENST00000560828 FANCD2Q9BXW9 1451 aa31.25■■■□□ 2.59
CPNE6-217ENST00000560828 WDR62O43379 1518 aa31.24■■■□□ 2.59
CPNE6-217ENST00000560828 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
CPNE6-217ENST00000560828 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
CPNE6-217ENST00000560828 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
CPNE6-217ENST00000560828 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
CPNE6-217ENST00000560828 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
CPNE6-217ENST00000560828 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
CPNE6-217ENST00000560828 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
CPNE6-217ENST00000560828 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
CPNE6-217ENST00000560828 ZNF608Q9ULD9 1512 aaPredicted RBP30.52■■■□□ 2.48
CPNE6-217ENST00000560828 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
CPNE6-217ENST00000560828 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
CPNE6-217ENST00000560828 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
CPNE6-217ENST00000560828 TARBP1Q13395 1621 aaKnown RBP30.37■■■□□ 2.45
CPNE6-217ENST00000560828 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
CPNE6-217ENST00000560828 AQRO60306 1485 aaKnown RBP eCLIP30.28■■■□□ 2.44
CPNE6-217ENST00000560828 SOGA1O94964 1423 aa30.26■■■□□ 2.43
CPNE6-217ENST00000560828 CUX1P39880 1505 aa30.25■■■□□ 2.43
CPNE6-217ENST00000560828 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
CPNE6-217ENST00000560828 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
CPNE6-217ENST00000560828 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
CPNE6-217ENST00000560828 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
CPNE6-217ENST00000560828 FGD5Q6ZNL6 1462 aa30.24■■■□□ 2.43
CPNE6-217ENST00000560828 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
CPNE6-217ENST00000560828 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
CPNE6-217ENST00000560828 CHD1O14646 1710 aa30.1■■■□□ 2.41
CPNE6-217ENST00000560828 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
CPNE6-217ENST00000560828 FBLN2P98095 1184 aa30.01■■■□□ 2.39
CPNE6-217ENST00000560828 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
CPNE6-217ENST00000560828 GRIN2BQ13224 1484 aa29.98■■■□□ 2.39
CPNE6-217ENST00000560828 MAGI1Q96QZ7 1491 aaPredicted RBP29.96■■■□□ 2.39
CPNE6-217ENST00000560828 ABCA10Q8WWZ4 1543 aa29.94■■■□□ 2.38
CPNE6-217ENST00000560828 GAPVD1Q14C86 1478 aa29.9■■■□□ 2.38
CPNE6-217ENST00000560828 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
CPNE6-217ENST00000560828 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
CPNE6-217ENST00000560828 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
CPNE6-217ENST00000560828 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
CPNE6-217ENST00000560828 ABCA5Q8WWZ7 1642 aa29.84■■■□□ 2.37
CPNE6-217ENST00000560828 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
CPNE6-217ENST00000560828 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
CPNE6-217ENST00000560828 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
CPNE6-217ENST00000560828 CLASP1Q7Z460 1538 aa29.77■■■□□ 2.36
CPNE6-217ENST00000560828 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
CPNE6-217ENST00000560828 CYB5RLQ6IPT4 315 aa29.7■■■□□ 2.35
CPNE6-217ENST00000560828 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
CPNE6-217ENST00000560828 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
CPNE6-217ENST00000560828 ERICH3Q5RHP9 1530 aa29.56■■■□□ 2.32
CPNE6-217ENST00000560828 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
CPNE6-217ENST00000560828 NUP160Q12769 1436 aa29.49■■■□□ 2.31
CPNE6-217ENST00000560828 CEP170Q5SW79 1584 aa29.44■■■□□ 2.3
CPNE6-217ENST00000560828 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
CPNE6-217ENST00000560828 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
CPNE6-217ENST00000560828 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
CPNE6-217ENST00000560828 ERCC6L2Q5T890 1561 aa29.27■■■□□ 2.28
CPNE6-217ENST00000560828 IGF1RP08069 1367 aa29.25■■■□□ 2.27
CPNE6-217ENST00000560828 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
CPNE6-217ENST00000560828 CUL7Q14999 1698 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms