RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
NEO1-211ENST00000560808 ABCC9O60706 1549 aa21.45■■□□□ 1.02
NEO1-211ENST00000560808 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
NEO1-211ENST00000560808 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
NEO1-211ENST00000560808 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
NEO1-211ENST00000560808 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
NEO1-211ENST00000560808 NACADO15069 1562 aa20.17■□□□□ 0.82
NEO1-211ENST00000560808 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
NEO1-211ENST00000560808 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
NEO1-211ENST00000560808 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
NEO1-211ENST00000560808 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
NEO1-211ENST00000560808 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
NEO1-211ENST00000560808 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
NEO1-211ENST00000560808 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
NEO1-211ENST00000560808 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
NEO1-211ENST00000560808 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.68
NEO1-211ENST00000560808 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
NEO1-211ENST00000560808 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
NEO1-211ENST00000560808 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
NEO1-211ENST00000560808 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
NEO1-211ENST00000560808 ATAD2BQ9ULI0 1458 aa18.62■□□□□ 0.57
NEO1-211ENST00000560808 ERCC6Q03468 1493 aa18.52■□□□□ 0.56
NEO1-211ENST00000560808 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
NEO1-211ENST00000560808 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
NEO1-211ENST00000560808 CUX2O14529 1486 aa18.46■□□□□ 0.54
NEO1-211ENST00000560808 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
NEO1-211ENST00000560808 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
NEO1-211ENST00000560808 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
NEO1-211ENST00000560808 NESP48681 1621 aa18.39■□□□□ 0.53
NEO1-211ENST00000560808 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
NEO1-211ENST00000560808 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
NEO1-211ENST00000560808 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
NEO1-211ENST00000560808 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
NEO1-211ENST00000560808 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
NEO1-211ENST00000560808 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.48
NEO1-211ENST00000560808 WIZO95785 1651 aa18.03■□□□□ 0.48
NEO1-211ENST00000560808 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
NEO1-211ENST00000560808 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
NEO1-211ENST00000560808 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
NEO1-211ENST00000560808 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
NEO1-211ENST00000560808 CFTRP13569 1480 aa17.89■□□□□ 0.45
NEO1-211ENST00000560808 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.45
NEO1-211ENST00000560808 WDR62O43379 1518 aa17.88■□□□□ 0.45
NEO1-211ENST00000560808 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
NEO1-211ENST00000560808 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
NEO1-211ENST00000560808 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
NEO1-211ENST00000560808 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
NEO1-211ENST00000560808 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
NEO1-211ENST00000560808 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
NEO1-211ENST00000560808 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
NEO1-211ENST00000560808 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
NEO1-211ENST00000560808 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
NEO1-211ENST00000560808 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEO1-211ENST00000560808 FBLN2P98095 1184 aa17.44■□□□□ 0.38
NEO1-211ENST00000560808 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
NEO1-211ENST00000560808 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
NEO1-211ENST00000560808 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
NEO1-211ENST00000560808 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
NEO1-211ENST00000560808 SOGA1O94964 1423 aa17.37■□□□□ 0.37
NEO1-211ENST00000560808 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
NEO1-211ENST00000560808 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
NEO1-211ENST00000560808 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
NEO1-211ENST00000560808 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
NEO1-211ENST00000560808 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
NEO1-211ENST00000560808 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
NEO1-211ENST00000560808 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
NEO1-211ENST00000560808 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
NEO1-211ENST00000560808 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
NEO1-211ENST00000560808 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
NEO1-211ENST00000560808 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
NEO1-211ENST00000560808 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
NEO1-211ENST00000560808 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
NEO1-211ENST00000560808 CUX1P39880 1505 aa17.21■□□□□ 0.34
NEO1-211ENST00000560808 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
NEO1-211ENST00000560808 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
NEO1-211ENST00000560808 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
NEO1-211ENST00000560808 CHD1O14646 1710 aa17.15■□□□□ 0.34
NEO1-211ENST00000560808 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
NEO1-211ENST00000560808 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
NEO1-211ENST00000560808 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
NEO1-211ENST00000560808 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
NEO1-211ENST00000560808 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
NEO1-211ENST00000560808 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
NEO1-211ENST00000560808 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
NEO1-211ENST00000560808 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
NEO1-211ENST00000560808 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
NEO1-211ENST00000560808 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
NEO1-211ENST00000560808 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
NEO1-211ENST00000560808 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
NEO1-211ENST00000560808 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
NEO1-211ENST00000560808 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
NEO1-211ENST00000560808 NUP160Q12769 1436 aa16.87■□□□□ 0.29
NEO1-211ENST00000560808 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
NEO1-211ENST00000560808 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
NEO1-211ENST00000560808 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
NEO1-211ENST00000560808 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
NEO1-211ENST00000560808 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
NEO1-211ENST00000560808 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
NEO1-211ENST00000560808 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
NEO1-211ENST00000560808 IGF1RP08069 1367 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms