RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
RMDN3-210ENST00000560779 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
RMDN3-210ENST00000560779 ABCC9O60706 1549 aa28.28■■■□□ 2.12
RMDN3-210ENST00000560779 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
RMDN3-210ENST00000560779 NACADO15069 1562 aa27.35■■□□□ 1.97
RMDN3-210ENST00000560779 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
RMDN3-210ENST00000560779 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
RMDN3-210ENST00000560779 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
RMDN3-210ENST00000560779 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
RMDN3-210ENST00000560779 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
RMDN3-210ENST00000560779 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
RMDN3-210ENST00000560779 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
RMDN3-210ENST00000560779 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
RMDN3-210ENST00000560779 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
RMDN3-210ENST00000560779 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
RMDN3-210ENST00000560779 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
RMDN3-210ENST00000560779 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
RMDN3-210ENST00000560779 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
RMDN3-210ENST00000560779 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
RMDN3-210ENST00000560779 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
RMDN3-210ENST00000560779 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
RMDN3-210ENST00000560779 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
RMDN3-210ENST00000560779 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
RMDN3-210ENST00000560779 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
RMDN3-210ENST00000560779 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
RMDN3-210ENST00000560779 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
RMDN3-210ENST00000560779 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
RMDN3-210ENST00000560779 WIZO95785 1651 aa24.94■■□□□ 1.58
RMDN3-210ENST00000560779 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
RMDN3-210ENST00000560779 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
RMDN3-210ENST00000560779 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
RMDN3-210ENST00000560779 NESP48681 1621 aa24.5■■□□□ 1.51
RMDN3-210ENST00000560779 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
RMDN3-210ENST00000560779 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
RMDN3-210ENST00000560779 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
RMDN3-210ENST00000560779 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
RMDN3-210ENST00000560779 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
RMDN3-210ENST00000560779 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
RMDN3-210ENST00000560779 CFTRP13569 1480 aa24.32■■□□□ 1.48
RMDN3-210ENST00000560779 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
RMDN3-210ENST00000560779 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
RMDN3-210ENST00000560779 CUX2O14529 1486 aa24.19■■□□□ 1.46
RMDN3-210ENST00000560779 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
RMDN3-210ENST00000560779 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
RMDN3-210ENST00000560779 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
RMDN3-210ENST00000560779 WDR62O43379 1518 aa24.05■■□□□ 1.44
RMDN3-210ENST00000560779 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
RMDN3-210ENST00000560779 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
RMDN3-210ENST00000560779 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
RMDN3-210ENST00000560779 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
RMDN3-210ENST00000560779 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
RMDN3-210ENST00000560779 CUX1P39880 1505 aa23.63■■□□□ 1.37
RMDN3-210ENST00000560779 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
RMDN3-210ENST00000560779 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
RMDN3-210ENST00000560779 BIVM-ERCC5R4GMW8 1640 aa23.54■■□□□ 1.36
RMDN3-210ENST00000560779 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
RMDN3-210ENST00000560779 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
RMDN3-210ENST00000560779 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
RMDN3-210ENST00000560779 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
RMDN3-210ENST00000560779 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
RMDN3-210ENST00000560779 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
RMDN3-210ENST00000560779 SOGA1O94964 1423 aa23.46■■□□□ 1.35
RMDN3-210ENST00000560779 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
RMDN3-210ENST00000560779 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RMDN3-210ENST00000560779 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
RMDN3-210ENST00000560779 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.322e-6■■■□□ 15.2
RMDN3-210ENST00000560779 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
RMDN3-210ENST00000560779 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
RMDN3-210ENST00000560779 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
RMDN3-210ENST00000560779 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
RMDN3-210ENST00000560779 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
RMDN3-210ENST00000560779 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
RMDN3-210ENST00000560779 CHD1O14646 1710 aa23.19■■□□□ 1.3
RMDN3-210ENST00000560779 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
RMDN3-210ENST00000560779 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
RMDN3-210ENST00000560779 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
RMDN3-210ENST00000560779 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
RMDN3-210ENST00000560779 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
RMDN3-210ENST00000560779 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
RMDN3-210ENST00000560779 KIF27Q86VH2 1401 aa23■■□□□ 1.27
RMDN3-210ENST00000560779 FBLN2P98095 1184 aa22.97■■□□□ 1.27
RMDN3-210ENST00000560779 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
RMDN3-210ENST00000560779 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
RMDN3-210ENST00000560779 CUL7Q14999 1698 aa22.94■■□□□ 1.26
RMDN3-210ENST00000560779 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
RMDN3-210ENST00000560779 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
RMDN3-210ENST00000560779 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
RMDN3-210ENST00000560779 IGF1RP08069 1367 aa22.86■■□□□ 1.25
RMDN3-210ENST00000560779 NUP160Q12769 1436 aa22.82■■□□□ 1.24
RMDN3-210ENST00000560779 CEP170Q5SW79 1584 aa22.81■■□□□ 1.24
RMDN3-210ENST00000560779 RIMBP3CA6NJZ7 1639 aa22.81■■□□□ 1.24
RMDN3-210ENST00000560779 RIMBP3BA6NNM3 1639 aa22.81■■□□□ 1.24
RMDN3-210ENST00000560779 RIMBP3Q9UFD9 1639 aa22.81■■□□□ 1.24
RMDN3-210ENST00000560779 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
RMDN3-210ENST00000560779 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
RMDN3-210ENST00000560779 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
RMDN3-210ENST00000560779 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
RMDN3-210ENST00000560779 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
RMDN3-210ENST00000560779 EEA1Q15075 1411 aa22.66■■□□□ 1.22
RMDN3-210ENST00000560779 RAPGEF2Q9Y4G8 1499 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms