RNA–Protein interactions for RNA: ENST00000560746.1

ISG20-211, Transcript of interferon stimulated exonuclease gene 20, humanhuman

TSL 3

Gene ISG20, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISG20-211ENST00000560746 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
ISG20-211ENST00000560746 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
ISG20-211ENST00000560746 ABCC9O60706 1549 aa22.41■■□□□ 1.18
ISG20-211ENST00000560746 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
ISG20-211ENST00000560746 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
ISG20-211ENST00000560746 NACADO15069 1562 aa21.25■□□□□ 0.99
ISG20-211ENST00000560746 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
ISG20-211ENST00000560746 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
ISG20-211ENST00000560746 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
ISG20-211ENST00000560746 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
ISG20-211ENST00000560746 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
ISG20-211ENST00000560746 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
ISG20-211ENST00000560746 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
ISG20-211ENST00000560746 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
ISG20-211ENST00000560746 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
ISG20-211ENST00000560746 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
ISG20-211ENST00000560746 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
ISG20-211ENST00000560746 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
ISG20-211ENST00000560746 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
ISG20-211ENST00000560746 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
ISG20-211ENST00000560746 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
ISG20-211ENST00000560746 SMARCA2P51531 1590 aa19.52■□□□□ 0.71
ISG20-211ENST00000560746 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
ISG20-211ENST00000560746 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
ISG20-211ENST00000560746 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
ISG20-211ENST00000560746 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
ISG20-211ENST00000560746 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
ISG20-211ENST00000560746 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
ISG20-211ENST00000560746 NESP48681 1621 aa19.29■□□□□ 0.68
ISG20-211ENST00000560746 CUX2O14529 1486 aa19.26■□□□□ 0.67
ISG20-211ENST00000560746 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
ISG20-211ENST00000560746 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
ISG20-211ENST00000560746 WIZO95785 1651 aa19.12■□□□□ 0.65
ISG20-211ENST00000560746 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.65
ISG20-211ENST00000560746 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.65
ISG20-211ENST00000560746 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
ISG20-211ENST00000560746 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
ISG20-211ENST00000560746 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
ISG20-211ENST00000560746 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
ISG20-211ENST00000560746 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
ISG20-211ENST00000560746 CFTRP13569 1480 aa18.86■□□□□ 0.61
ISG20-211ENST00000560746 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
ISG20-211ENST00000560746 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
ISG20-211ENST00000560746 WDR62O43379 1518 aa18.79■□□□□ 0.6
ISG20-211ENST00000560746 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
ISG20-211ENST00000560746 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
ISG20-211ENST00000560746 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
ISG20-211ENST00000560746 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
ISG20-211ENST00000560746 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
ISG20-211ENST00000560746 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
ISG20-211ENST00000560746 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
ISG20-211ENST00000560746 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
ISG20-211ENST00000560746 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
ISG20-211ENST00000560746 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
ISG20-211ENST00000560746 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
ISG20-211ENST00000560746 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
ISG20-211ENST00000560746 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
ISG20-211ENST00000560746 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
ISG20-211ENST00000560746 SOGA1O94964 1423 aa18.27■□□□□ 0.52
ISG20-211ENST00000560746 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
ISG20-211ENST00000560746 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
ISG20-211ENST00000560746 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
ISG20-211ENST00000560746 FBLN2P98095 1184 aa18.2■□□□□ 0.5
ISG20-211ENST00000560746 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
ISG20-211ENST00000560746 CUX1P39880 1505 aa18.18■□□□□ 0.5
ISG20-211ENST00000560746 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
ISG20-211ENST00000560746 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
ISG20-211ENST00000560746 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
ISG20-211ENST00000560746 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
ISG20-211ENST00000560746 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
ISG20-211ENST00000560746 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
ISG20-211ENST00000560746 CHD1O14646 1710 aa18.08■□□□□ 0.48
ISG20-211ENST00000560746 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
ISG20-211ENST00000560746 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
ISG20-211ENST00000560746 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
ISG20-211ENST00000560746 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
ISG20-211ENST00000560746 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
ISG20-211ENST00000560746 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
ISG20-211ENST00000560746 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
ISG20-211ENST00000560746 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
ISG20-211ENST00000560746 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
ISG20-211ENST00000560746 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
ISG20-211ENST00000560746 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
ISG20-211ENST00000560746 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
ISG20-211ENST00000560746 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
ISG20-211ENST00000560746 PBRM1Q86U86 1689 aa17.89■□□□□ 0.45
ISG20-211ENST00000560746 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
ISG20-211ENST00000560746 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
ISG20-211ENST00000560746 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
ISG20-211ENST00000560746 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
ISG20-211ENST00000560746 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
ISG20-211ENST00000560746 NUP160Q12769 1436 aa17.75■□□□□ 0.43
ISG20-211ENST00000560746 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
ISG20-211ENST00000560746 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
ISG20-211ENST00000560746 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
ISG20-211ENST00000560746 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
ISG20-211ENST00000560746 IGF1RP08069 1367 aa17.66■□□□□ 0.42
ISG20-211ENST00000560746 KIF27Q86VH2 1401 aa17.63■□□□□ 0.41
ISG20-211ENST00000560746 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
ISG20-211ENST00000560746 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms