RNA–Protein interactions for RNA: ENST00000560736.5

PCK2-214, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 3

Gene PCK2, Length 897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-214ENST00000560736 NISCHQ9Y2I1 1504 aa56.66■■■■■ 6.66
PCK2-214ENST00000560736 ABCC9O60706 1549 aa50.86■■■■■ 5.73
PCK2-214ENST00000560736 CCDC180Q9P1Z9 1646 aa50.78■■■■■ 5.72
PCK2-214ENST00000560736 RB1CC1Q8TDY2 1594 aa48.39■■■■■ 5.34
PCK2-214ENST00000560736 NACADO15069 1562 aa48.07■■■■■ 5.29
PCK2-214ENST00000560736 DCAF8L2P0C7V8 631 aa47.93■■■■■ 5.26
PCK2-214ENST00000560736 DNAJC5BQ9UF47 199 aa47.78■■■■■ 5.24
PCK2-214ENST00000560736 MYO15BQ96JP2 1530 aa47.41■■■■■ 5.18
PCK2-214ENST00000560736 PABPN1Q86U42 306 aaKnown RBP eCLIP47.41■■■■■ 5.18
PCK2-214ENST00000560736 UNC13AQ9UPW8 1703 aa47.22■■■■■ 5.15
PCK2-214ENST00000560736 BICRAQ9NZM4 1560 aa46.97■■■■■ 5.11
PCK2-214ENST00000560736 ZCCHC6Q5VYS8 1495 aaKnown RBP46.93■■■■■ 5.1
PCK2-214ENST00000560736 DCAF1Q9Y4B6 1507 aa46.79■■■■■ 5.08
PCK2-214ENST00000560736 SHROOM4Q9ULL8 1493 aa46.35■■■■■ 5.01
PCK2-214ENST00000560736 SCRIBQ14160 1630 aa46.29■■■■■ 5
PCK2-214ENST00000560736 CC2D2AQ9P2K1 1620 aa45.92■■■■■ 4.94
PCK2-214ENST00000560736 CECR2Q9BXF3 1484 aa45.83■■■■■ 4.93
PCK2-214ENST00000560736 EIF4G1Q04637 1599 aaKnown RBP45.83■■■■■ 4.93
PCK2-214ENST00000560736 NCAPD3P42695 1498 aa44.41■■■■■ 4.7
PCK2-214ENST00000560736 ATAD2BQ9ULI0 1458 aa44.26■■■■■ 4.68
PCK2-214ENST00000560736 SMARCA4P51532 1647 aa44.17■■■■■ 4.66
PCK2-214ENST00000560736 SMARCA2P51531 1590 aa44.13■■■■■ 4.65
PCK2-214ENST00000560736 HMGXB3Q12766 1538 aa44.03■■■■■ 4.64
PCK2-214ENST00000560736 BAZ1AQ9NRL2 1556 aaPredicted RBP43.97■■■■■ 4.63
PCK2-214ENST00000560736 ERCC6Q03468 1493 aa43.93■■■■■ 4.62
PCK2-214ENST00000560736 DNAJC5Q9H3Z4 198 aa43.91■■■■■ 4.62
PCK2-214ENST00000560736 CUX2O14529 1486 aa43.85■■■■■ 4.61
PCK2-214ENST00000560736 BAZ1BQ9UIG0 1483 aaKnown RBP43.82■■■■■ 4.6
PCK2-214ENST00000560736 PEG3Q9GZU2 1588 aa43.75■■■■■ 4.59
PCK2-214ENST00000560736 NESP48681 1621 aa43.69■■■■■ 4.58
PCK2-214ENST00000560736 MROH2BQ7Z745 1585 aa43.65■■■■■ 4.58
PCK2-214ENST00000560736 LAMC3Q9Y6N6 1575 aa43.37■■■■■ 4.53
PCK2-214ENST00000560736 THOC2Q8NI27 1593 aaKnown RBP43.19■■■■■ 4.5
PCK2-214ENST00000560736 PDS5BQ9NTI5 1447 aa43.18■■■■■ 4.5
PCK2-214ENST00000560736 WIZO95785 1651 aa43.1■■■■■ 4.49
PCK2-214ENST00000560736 CADPSQ9ULU8 1353 aa43.08■■■■■ 4.49
PCK2-214ENST00000560736 KIF21AQ7Z4S6 1674 aa43.06■■■■■ 4.48
PCK2-214ENST00000560736 RSF1Q96T23 1441 aaPredicted RBP42.77■■■■■ 4.44
PCK2-214ENST00000560736 MRC2Q9UBG0 1479 aa42.76■■■■■ 4.44
PCK2-214ENST00000560736 WDR62O43379 1518 aa42.63■■■■■ 4.42
PCK2-214ENST00000560736 CEP164Q9UPV0 1460 aa42.6■■■■■ 4.41
PCK2-214ENST00000560736 TOP2AP11388 1531 aaKnown RBP42.56■■■■■ 4.4
PCK2-214ENST00000560736 CFTRP13569 1480 aa42.56■■■■■ 4.4
PCK2-214ENST00000560736 FANCD2Q9BXW9 1451 aa42.55■■■■■ 4.4
PCK2-214ENST00000560736 URB2Q14146 1524 aaKnown RBP42.19■■■■■ 4.34
PCK2-214ENST00000560736 CCDC88BA6NC98 1476 aa42.12■■■■■ 4.33
PCK2-214ENST00000560736 PRDM2Q13029 1718 aa42.02■■■■■ 4.32
PCK2-214ENST00000560736 TRIM41Q8WV44 630 aa41.96■■■■■ 4.31
PCK2-214ENST00000560736 OSCARQ8IYS5 282 aa41.93■■■■■ 4.3
PCK2-214ENST00000560736 IFT140Q96RY7 1462 aa41.76■■■■■ 4.28
PCK2-214ENST00000560736 TOPBP1Q92547 1522 aa41.74■■■■■ 4.27
PCK2-214ENST00000560736 ABCC8Q09428 1581 aa41.68■■■■■ 4.26
PCK2-214ENST00000560736 ZNF608Q9ULD9 1512 aaPredicted RBP41.68■■■■■ 4.26
PCK2-214ENST00000560736 DNMBPQ6XZF7 1577 aa41.56■■■■■ 4.24
PCK2-214ENST00000560736 EIF4G3O43432 1585 aaKnown RBP41.39■■■■■ 4.22
PCK2-214ENST00000560736 TARBP1Q13395 1621 aaKnown RBP41.34■■■■■ 4.21
PCK2-214ENST00000560736 AQRO60306 1485 aaKnown RBP eCLIP41.33■■■■■ 4.216e-7■■■■■ 29.6
PCK2-214ENST00000560736 POLA1P09884 1462 aaPredicted RBP41.31■■■■■ 4.2
PCK2-214ENST00000560736 RIMBP3CA6NJZ7 1639 aa41.26■■■■■ 4.2
PCK2-214ENST00000560736 RIMBP3BA6NNM3 1639 aa41.26■■■■■ 4.2
PCK2-214ENST00000560736 RIMBP3Q9UFD9 1639 aa41.26■■■■■ 4.2
PCK2-214ENST00000560736 SOGA1O94964 1423 aa41.18■■■■■ 4.18
PCK2-214ENST00000560736 RAD54L2Q9Y4B4 1467 aa41.17■■■■■ 4.18
PCK2-214ENST00000560736 ARHGEF11O15085 1522 aa41.16■■■■■ 4.18
PCK2-214ENST00000560736 FBLN2P98095 1184 aa41.11■■■■■ 4.17
PCK2-214ENST00000560736 TDRD9Q8NDG6 1382 aaKnown RBP41.09■■■■■ 4.17
PCK2-214ENST00000560736 CHD1O14646 1710 aa41.08■■■■■ 4.17
PCK2-214ENST00000560736 FGD5Q6ZNL6 1462 aa41.04■■■■■ 4.16
PCK2-214ENST00000560736 CUX1P39880 1505 aa41.01■■■■■ 4.16
PCK2-214ENST00000560736 CYB5RLQ6IPT4 315 aa40.94■■■■■ 4.14
PCK2-214ENST00000560736 SUPT5HO00267 1087 aaKnown RBP40.93■■■■■ 4.14
PCK2-214ENST00000560736 WDR97A6NE52 1622 aa40.93■■■■■ 4.14
PCK2-214ENST00000560736 SNAPC4Q5SXM2 1469 aa40.87■■■■■ 4.13
PCK2-214ENST00000560736 CHMP7Q8WUX9 453 aaPredicted RBP40.81■■■■■ 4.12
PCK2-214ENST00000560736 GRIN2BQ13224 1484 aa40.79■■■■■ 4.12
PCK2-214ENST00000560736 MAGI1Q96QZ7 1491 aaPredicted RBP40.77■■■■■ 4.12
PCK2-214ENST00000560736 ARAP1Q96P48 1450 aa40.75■■■■■ 4.11
PCK2-214ENST00000560736 GAPVD1Q14C86 1478 aa40.65■■■■■ 4.1
PCK2-214ENST00000560736 SYNJ2O15056 1496 aa40.64■■■■■ 4.1
PCK2-214ENST00000560736 CLASP1Q7Z460 1538 aa40.64■■■■■ 4.1
PCK2-214ENST00000560736 SYNJ1O43426 1573 aa40.64■■■■■ 4.1
PCK2-214ENST00000560736 ABCA10Q8WWZ4 1543 aa40.59■■■■■ 4.09
PCK2-214ENST00000560736 PBRM1Q86U86 1689 aa40.54■■■■■ 4.08
PCK2-214ENST00000560736 TRHP20396 242 aaPredicted RBP40.5■■■■■ 4.07
PCK2-214ENST00000560736 ABCA5Q8WWZ7 1642 aa40.49■■■■■ 4.07
PCK2-214ENST00000560736 WRNQ14191 1432 aaPredicted RBP eCLIP40.46■■■■■ 4.07
PCK2-214ENST00000560736 TOP2BQ02880 1626 aa40.34■■■■■ 4.05
PCK2-214ENST00000560736 BIVM-ERCC5R4GMW8 1640 aa40.31■■■■■ 4.04
PCK2-214ENST00000560736 GRIN2AQ12879 1464 aa40.25■■■■■ 4.03
PCK2-214ENST00000560736 ADAMTS12P58397 1594 aa40.18■■■■■ 4.02
PCK2-214ENST00000560736 FHAD1B1AJZ9 1412 aa40.14■■■■■ 4.02
PCK2-214ENST00000560736 NUP160Q12769 1436 aa40.12■■■■■ 4.01
PCK2-214ENST00000560736 ERICH3Q5RHP9 1530 aa40.08■■■■■ 4.01
PCK2-214ENST00000560736 CEP170Q5SW79 1584 aa40.07■■■■■ 4.01
PCK2-214ENST00000560736 ERCC6L2Q5T890 1561 aa40.01■■■■□ 3.99
PCK2-214ENST00000560736 SHROOM2Q13796 1616 aa39.9■■■■□ 3.98
PCK2-214ENST00000560736 JPH4Q96JJ6 628 aa39.79■■■■□ 3.96
PCK2-214ENST00000560736 PRG4Q92954 1404 aaPredicted RBP39.76■■■■□ 3.96
PCK2-214ENST00000560736 IGF1RP08069 1367 aa39.62■■■■□ 3.93
PCK2-214ENST00000560736 KIF27Q86VH2 1401 aa39.61■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms