RNA–Protein interactions for RNA: ENST00000560694.1

RNF213-211, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-211ENST00000560694 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
RNF213-211ENST00000560694 ABCC9O60706 1549 aa22.79■■□□□ 1.24
RNF213-211ENST00000560694 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
RNF213-211ENST00000560694 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
RNF213-211ENST00000560694 NACADO15069 1562 aa21.48■■□□□ 1.03
RNF213-211ENST00000560694 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
RNF213-211ENST00000560694 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
RNF213-211ENST00000560694 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
RNF213-211ENST00000560694 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
RNF213-211ENST00000560694 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
RNF213-211ENST00000560694 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
RNF213-211ENST00000560694 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
RNF213-211ENST00000560694 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
RNF213-211ENST00000560694 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
RNF213-211ENST00000560694 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
RNF213-211ENST00000560694 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
RNF213-211ENST00000560694 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
RNF213-211ENST00000560694 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
RNF213-211ENST00000560694 NCAPD3P42695 1498 aa19.83■□□□□ 0.76
RNF213-211ENST00000560694 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
RNF213-211ENST00000560694 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
RNF213-211ENST00000560694 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
RNF213-211ENST00000560694 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
RNF213-211ENST00000560694 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
RNF213-211ENST00000560694 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
RNF213-211ENST00000560694 NESP48681 1621 aa19.61■□□□□ 0.73
RNF213-211ENST00000560694 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
RNF213-211ENST00000560694 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
RNF213-211ENST00000560694 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
RNF213-211ENST00000560694 CUX2O14529 1486 aa19.58■□□□□ 0.72
RNF213-211ENST00000560694 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
RNF213-211ENST00000560694 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
RNF213-211ENST00000560694 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
RNF213-211ENST00000560694 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
RNF213-211ENST00000560694 WIZO95785 1651 aa19.36■□□□□ 0.69
RNF213-211ENST00000560694 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
RNF213-211ENST00000560694 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
RNF213-211ENST00000560694 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
RNF213-211ENST00000560694 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
RNF213-211ENST00000560694 WDR62O43379 1518 aa19.09■□□□□ 0.65
RNF213-211ENST00000560694 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
RNF213-211ENST00000560694 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
RNF213-211ENST00000560694 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
RNF213-211ENST00000560694 CFTRP13569 1480 aa19.03■□□□□ 0.64
RNF213-211ENST00000560694 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
RNF213-211ENST00000560694 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
RNF213-211ENST00000560694 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
RNF213-211ENST00000560694 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
RNF213-211ENST00000560694 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
RNF213-211ENST00000560694 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
RNF213-211ENST00000560694 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
RNF213-211ENST00000560694 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
RNF213-211ENST00000560694 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
RNF213-211ENST00000560694 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
RNF213-211ENST00000560694 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
RNF213-211ENST00000560694 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
RNF213-211ENST00000560694 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
RNF213-211ENST00000560694 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
RNF213-211ENST00000560694 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
RNF213-211ENST00000560694 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■■□ 25.3
RNF213-211ENST00000560694 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
RNF213-211ENST00000560694 CHD1O14646 1710 aa18.47■□□□□ 0.55
RNF213-211ENST00000560694 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
RNF213-211ENST00000560694 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
RNF213-211ENST00000560694 SOGA1O94964 1423 aa18.39■□□□□ 0.53
RNF213-211ENST00000560694 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
RNF213-211ENST00000560694 CUX1P39880 1505 aa18.39■□□□□ 0.53
RNF213-211ENST00000560694 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
RNF213-211ENST00000560694 FBLN2P98095 1184 aa18.34■□□□□ 0.53
RNF213-211ENST00000560694 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
RNF213-211ENST00000560694 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
RNF213-211ENST00000560694 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
RNF213-211ENST00000560694 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
RNF213-211ENST00000560694 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
RNF213-211ENST00000560694 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
RNF213-211ENST00000560694 CLASP1Q7Z460 1538 aa18.22■□□□□ 0.51
RNF213-211ENST00000560694 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
RNF213-211ENST00000560694 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
RNF213-211ENST00000560694 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
RNF213-211ENST00000560694 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
RNF213-211ENST00000560694 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
RNF213-211ENST00000560694 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
RNF213-211ENST00000560694 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
RNF213-211ENST00000560694 ABCA10Q8WWZ4 1543 aa18.15■□□□□ 0.5
RNF213-211ENST00000560694 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
RNF213-211ENST00000560694 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
RNF213-211ENST00000560694 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
RNF213-211ENST00000560694 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
RNF213-211ENST00000560694 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
RNF213-211ENST00000560694 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
RNF213-211ENST00000560694 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
RNF213-211ENST00000560694 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
RNF213-211ENST00000560694 NUP160Q12769 1436 aa17.94■□□□□ 0.46
RNF213-211ENST00000560694 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
RNF213-211ENST00000560694 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
RNF213-211ENST00000560694 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
RNF213-211ENST00000560694 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
RNF213-211ENST00000560694 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
RNF213-211ENST00000560694 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
RNF213-211ENST00000560694 IGF1RP08069 1367 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms