RNA–Protein interactions for RNA: ENST00000560670.5

TNFAIP2-208, Transcript of TNF alpha induced protein 2, humanhuman

TSL 2

Gene TNFAIP2, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-208ENST00000560670 NISCHQ9Y2I1 1504 aa32.23■■■□□ 2.75
TNFAIP2-208ENST00000560670 ABCC9O60706 1549 aa29.69■■■□□ 2.34
TNFAIP2-208ENST00000560670 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.26
TNFAIP2-208ENST00000560670 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
TNFAIP2-208ENST00000560670 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
TNFAIP2-208ENST00000560670 NACADO15069 1562 aa27.72■■■□□ 2.03
TNFAIP2-208ENST00000560670 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
TNFAIP2-208ENST00000560670 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
TNFAIP2-208ENST00000560670 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
TNFAIP2-208ENST00000560670 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
TNFAIP2-208ENST00000560670 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
TNFAIP2-208ENST00000560670 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.9
TNFAIP2-208ENST00000560670 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
TNFAIP2-208ENST00000560670 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
TNFAIP2-208ENST00000560670 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
TNFAIP2-208ENST00000560670 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
TNFAIP2-208ENST00000560670 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
TNFAIP2-208ENST00000560670 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
TNFAIP2-208ENST00000560670 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
TNFAIP2-208ENST00000560670 CUX2O14529 1486 aa25.91■■□□□ 1.74
TNFAIP2-208ENST00000560670 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
TNFAIP2-208ENST00000560670 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
TNFAIP2-208ENST00000560670 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
TNFAIP2-208ENST00000560670 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
TNFAIP2-208ENST00000560670 NESP48681 1621 aa25.35■■□□□ 1.65
TNFAIP2-208ENST00000560670 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
TNFAIP2-208ENST00000560670 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
TNFAIP2-208ENST00000560670 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
TNFAIP2-208ENST00000560670 LAMC3Q9Y6N6 1575 aa25.12■■□□□ 1.61
TNFAIP2-208ENST00000560670 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
TNFAIP2-208ENST00000560670 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
TNFAIP2-208ENST00000560670 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
TNFAIP2-208ENST00000560670 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
TNFAIP2-208ENST00000560670 BAZ1AQ9NRL2 1556 aaPredicted RBP25.02■■□□□ 1.6
TNFAIP2-208ENST00000560670 PDS5BQ9NTI5 1447 aa24.96■■□□□ 1.59
TNFAIP2-208ENST00000560670 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
TNFAIP2-208ENST00000560670 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
TNFAIP2-208ENST00000560670 WDR62O43379 1518 aa24.78■■□□□ 1.56
TNFAIP2-208ENST00000560670 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
TNFAIP2-208ENST00000560670 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
TNFAIP2-208ENST00000560670 OSCARQ8IYS5 282 aa24.58■■□□□ 1.52
TNFAIP2-208ENST00000560670 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
TNFAIP2-208ENST00000560670 WIZO95785 1651 aa24.53■■□□□ 1.52
TNFAIP2-208ENST00000560670 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
TNFAIP2-208ENST00000560670 CFTRP13569 1480 aa24.37■■□□□ 1.49
TNFAIP2-208ENST00000560670 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
TNFAIP2-208ENST00000560670 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
TNFAIP2-208ENST00000560670 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
TNFAIP2-208ENST00000560670 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
TNFAIP2-208ENST00000560670 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
TNFAIP2-208ENST00000560670 ARHGEF11O15085 1522 aa24.22■■□□□ 1.47
TNFAIP2-208ENST00000560670 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
TNFAIP2-208ENST00000560670 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
TNFAIP2-208ENST00000560670 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
TNFAIP2-208ENST00000560670 CYB5RLQ6IPT4 315 aa24.01■■□□□ 1.43
TNFAIP2-208ENST00000560670 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
TNFAIP2-208ENST00000560670 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
TNFAIP2-208ENST00000560670 TOPBP1Q92547 1522 aa23.95■■□□□ 1.42
TNFAIP2-208ENST00000560670 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
TNFAIP2-208ENST00000560670 CHD1O14646 1710 aa23.92■■□□□ 1.42
TNFAIP2-208ENST00000560670 TRHP20396 242 aaPredicted RBP23.91■■□□□ 1.42
TNFAIP2-208ENST00000560670 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
TNFAIP2-208ENST00000560670 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
TNFAIP2-208ENST00000560670 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
TNFAIP2-208ENST00000560670 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
TNFAIP2-208ENST00000560670 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.48e-7■■■■■ 42.7
TNFAIP2-208ENST00000560670 FBLN2P98095 1184 aa23.7■■□□□ 1.38
TNFAIP2-208ENST00000560670 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
TNFAIP2-208ENST00000560670 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
TNFAIP2-208ENST00000560670 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
TNFAIP2-208ENST00000560670 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
TNFAIP2-208ENST00000560670 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
TNFAIP2-208ENST00000560670 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
TNFAIP2-208ENST00000560670 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
TNFAIP2-208ENST00000560670 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
TNFAIP2-208ENST00000560670 SOGA1O94964 1423 aa23.52■■□□□ 1.36
TNFAIP2-208ENST00000560670 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP2-208ENST00000560670 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
TNFAIP2-208ENST00000560670 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
TNFAIP2-208ENST00000560670 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
TNFAIP2-208ENST00000560670 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
TNFAIP2-208ENST00000560670 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
TNFAIP2-208ENST00000560670 CUX1P39880 1505 aa23.31■■□□□ 1.32
TNFAIP2-208ENST00000560670 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
TNFAIP2-208ENST00000560670 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
TNFAIP2-208ENST00000560670 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
TNFAIP2-208ENST00000560670 BIVM-ERCC5R4GMW8 1640 aa23.17■■□□□ 1.3
TNFAIP2-208ENST00000560670 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
TNFAIP2-208ENST00000560670 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
TNFAIP2-208ENST00000560670 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
TNFAIP2-208ENST00000560670 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
TNFAIP2-208ENST00000560670 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
TNFAIP2-208ENST00000560670 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
TNFAIP2-208ENST00000560670 NUP160Q12769 1436 aa23.08■■□□□ 1.29
TNFAIP2-208ENST00000560670 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
TNFAIP2-208ENST00000560670 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
TNFAIP2-208ENST00000560670 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
TNFAIP2-208ENST00000560670 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
TNFAIP2-208ENST00000560670 PRG4Q92954 1404 aaPredicted RBP22.86■■□□□ 1.25
TNFAIP2-208ENST00000560670 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms