RNA–Protein interactions for RNA: ENST00000560666.1

CA12-206, Transcript of carbonic anhydrase 12, humanhuman

TSL 3

Gene CA12, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA12-206ENST00000560666 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
CA12-206ENST00000560666 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
CA12-206ENST00000560666 ABCC9O60706 1549 aa25.6■■□□□ 1.69
CA12-206ENST00000560666 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
CA12-206ENST00000560666 NACADO15069 1562 aa24.25■■□□□ 1.47
CA12-206ENST00000560666 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
CA12-206ENST00000560666 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
CA12-206ENST00000560666 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
CA12-206ENST00000560666 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
CA12-206ENST00000560666 UNC13AQ9UPW8 1703 aa23.84■■□□□ 1.41
CA12-206ENST00000560666 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
CA12-206ENST00000560666 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
CA12-206ENST00000560666 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
CA12-206ENST00000560666 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
CA12-206ENST00000560666 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
CA12-206ENST00000560666 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
CA12-206ENST00000560666 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
CA12-206ENST00000560666 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
CA12-206ENST00000560666 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
CA12-206ENST00000560666 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
CA12-206ENST00000560666 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
CA12-206ENST00000560666 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
CA12-206ENST00000560666 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
CA12-206ENST00000560666 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
CA12-206ENST00000560666 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
CA12-206ENST00000560666 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
CA12-206ENST00000560666 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
CA12-206ENST00000560666 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
CA12-206ENST00000560666 NESP48681 1621 aa22.03■■□□□ 1.12
CA12-206ENST00000560666 CUX2O14529 1486 aa22.02■■□□□ 1.12
CA12-206ENST00000560666 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
CA12-206ENST00000560666 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
CA12-206ENST00000560666 WIZO95785 1651 aa21.85■■□□□ 1.09
CA12-206ENST00000560666 THOC2Q8NI27 1593 aaKnown RBP21.77■■□□□ 1.08
CA12-206ENST00000560666 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
CA12-206ENST00000560666 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
CA12-206ENST00000560666 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
CA12-206ENST00000560666 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
CA12-206ENST00000560666 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
CA12-206ENST00000560666 MRC2Q9UBG0 1479 aa21.56■■□□□ 1.04
CA12-206ENST00000560666 CFTRP13569 1480 aa21.51■■□□□ 1.03
CA12-206ENST00000560666 WDR62O43379 1518 aa21.5■■□□□ 1.03
CA12-206ENST00000560666 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
CA12-206ENST00000560666 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CA12-206ENST00000560666 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
CA12-206ENST00000560666 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
CA12-206ENST00000560666 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
CA12-206ENST00000560666 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
CA12-206ENST00000560666 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
CA12-206ENST00000560666 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
CA12-206ENST00000560666 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
CA12-206ENST00000560666 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
CA12-206ENST00000560666 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
CA12-206ENST00000560666 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
CA12-206ENST00000560666 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
CA12-206ENST00000560666 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
CA12-206ENST00000560666 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
CA12-206ENST00000560666 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
CA12-206ENST00000560666 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
CA12-206ENST00000560666 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
CA12-206ENST00000560666 SOGA1O94964 1423 aa20.79■□□□□ 0.92
CA12-206ENST00000560666 CUX1P39880 1505 aa20.77■□□□□ 0.92
CA12-206ENST00000560666 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
CA12-206ENST00000560666 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
CA12-206ENST00000560666 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
CA12-206ENST00000560666 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
CA12-206ENST00000560666 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
CA12-206ENST00000560666 CHD1O14646 1710 aa20.72■□□□□ 0.91
CA12-206ENST00000560666 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
CA12-206ENST00000560666 FBLN2P98095 1184 aa20.69■□□□□ 0.9
CA12-206ENST00000560666 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
CA12-206ENST00000560666 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
CA12-206ENST00000560666 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
CA12-206ENST00000560666 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
CA12-206ENST00000560666 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
CA12-206ENST00000560666 CYB5RLQ6IPT4 315 aa20.54■□□□□ 0.88
CA12-206ENST00000560666 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
CA12-206ENST00000560666 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
CA12-206ENST00000560666 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
CA12-206ENST00000560666 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
CA12-206ENST00000560666 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CA12-206ENST00000560666 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
CA12-206ENST00000560666 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
CA12-206ENST00000560666 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
CA12-206ENST00000560666 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
CA12-206ENST00000560666 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
CA12-206ENST00000560666 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
CA12-206ENST00000560666 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
CA12-206ENST00000560666 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
CA12-206ENST00000560666 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
CA12-206ENST00000560666 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
CA12-206ENST00000560666 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
CA12-206ENST00000560666 NUP160Q12769 1436 aa20.27■□□□□ 0.83
CA12-206ENST00000560666 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
CA12-206ENST00000560666 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
CA12-206ENST00000560666 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
CA12-206ENST00000560666 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
CA12-206ENST00000560666 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
CA12-206ENST00000560666 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
CA12-206ENST00000560666 IGF1RP08069 1367 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms