RNA–Protein interactions for RNA: ENST00000560663.5

MIR9-3HG-210, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-210ENST00000560663 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
MIR9-3HG-210ENST00000560663 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
MIR9-3HG-210ENST00000560663 ABCC9O60706 1549 aa35.76■■■■□ 3.31
MIR9-3HG-210ENST00000560663 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
MIR9-3HG-210ENST00000560663 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
MIR9-3HG-210ENST00000560663 NACADO15069 1562 aa34.35■■■■□ 3.09
MIR9-3HG-210ENST00000560663 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.09
MIR9-3HG-210ENST00000560663 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
MIR9-3HG-210ENST00000560663 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
MIR9-3HG-210ENST00000560663 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
MIR9-3HG-210ENST00000560663 PABPN1Q86U42 306 aaKnown RBP eCLIP33.5■■■□□ 2.95
MIR9-3HG-210ENST00000560663 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
MIR9-3HG-210ENST00000560663 SCRIBQ14160 1630 aa33.37■■■□□ 2.93
MIR9-3HG-210ENST00000560663 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
MIR9-3HG-210ENST00000560663 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
MIR9-3HG-210ENST00000560663 EIF4G1Q04637 1599 aaKnown RBP32.47■■■□□ 2.79
MIR9-3HG-210ENST00000560663 CC2D2AQ9P2K1 1620 aa32.31■■■□□ 2.76
MIR9-3HG-210ENST00000560663 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
MIR9-3HG-210ENST00000560663 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
MIR9-3HG-210ENST00000560663 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
MIR9-3HG-210ENST00000560663 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
MIR9-3HG-210ENST00000560663 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
MIR9-3HG-210ENST00000560663 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
MIR9-3HG-210ENST00000560663 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
MIR9-3HG-210ENST00000560663 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
MIR9-3HG-210ENST00000560663 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
MIR9-3HG-210ENST00000560663 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
MIR9-3HG-210ENST00000560663 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
MIR9-3HG-210ENST00000560663 WIZO95785 1651 aa31.41■■■□□ 2.62
MIR9-3HG-210ENST00000560663 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
MIR9-3HG-210ENST00000560663 NESP48681 1621 aa31.01■■■□□ 2.55
MIR9-3HG-210ENST00000560663 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
MIR9-3HG-210ENST00000560663 LAMC3Q9Y6N6 1575 aa30.81■■■□□ 2.52
MIR9-3HG-210ENST00000560663 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
MIR9-3HG-210ENST00000560663 ERCC6Q03468 1493 aa30.72■■■□□ 2.51
MIR9-3HG-210ENST00000560663 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
MIR9-3HG-210ENST00000560663 CFTRP13569 1480 aa30.69■■■□□ 2.5
MIR9-3HG-210ENST00000560663 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
MIR9-3HG-210ENST00000560663 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
MIR9-3HG-210ENST00000560663 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
MIR9-3HG-210ENST00000560663 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
MIR9-3HG-210ENST00000560663 CUX2O14529 1486 aa30.41■■■□□ 2.46
MIR9-3HG-210ENST00000560663 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
MIR9-3HG-210ENST00000560663 MRC2Q9UBG0 1479 aa30.34■■■□□ 2.45
MIR9-3HG-210ENST00000560663 WDR62O43379 1518 aa30.26■■■□□ 2.43
MIR9-3HG-210ENST00000560663 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
MIR9-3HG-210ENST00000560663 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
MIR9-3HG-210ENST00000560663 TOPBP1Q92547 1522 aa30■■■□□ 2.39
MIR9-3HG-210ENST00000560663 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
MIR9-3HG-210ENST00000560663 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
MIR9-3HG-210ENST00000560663 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
MIR9-3HG-210ENST00000560663 CUX1P39880 1505 aa29.83■■■□□ 2.37
MIR9-3HG-210ENST00000560663 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
MIR9-3HG-210ENST00000560663 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
MIR9-3HG-210ENST00000560663 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
MIR9-3HG-210ENST00000560663 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
MIR9-3HG-210ENST00000560663 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
MIR9-3HG-210ENST00000560663 TARBP1Q13395 1621 aaKnown RBP29.65■■■□□ 2.34
MIR9-3HG-210ENST00000560663 WRNQ14191 1432 aaPredicted RBP eCLIP29.63■■■□□ 2.33
MIR9-3HG-210ENST00000560663 SOGA1O94964 1423 aa29.62■■■□□ 2.33
MIR9-3HG-210ENST00000560663 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
MIR9-3HG-210ENST00000560663 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.32
MIR9-3HG-210ENST00000560663 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
MIR9-3HG-210ENST00000560663 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
MIR9-3HG-210ENST00000560663 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
MIR9-3HG-210ENST00000560663 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
MIR9-3HG-210ENST00000560663 ABCA10Q8WWZ4 1543 aa29.41■■■□□ 2.3
MIR9-3HG-210ENST00000560663 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
MIR9-3HG-210ENST00000560663 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
MIR9-3HG-210ENST00000560663 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.27
MIR9-3HG-210ENST00000560663 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
MIR9-3HG-210ENST00000560663 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
MIR9-3HG-210ENST00000560663 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
MIR9-3HG-210ENST00000560663 MAGI1Q96QZ7 1491 aaPredicted RBP29.14■■■□□ 2.26
MIR9-3HG-210ENST00000560663 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
MIR9-3HG-210ENST00000560663 FBLN2P98095 1184 aa29.07■■■□□ 2.24
MIR9-3HG-210ENST00000560663 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
MIR9-3HG-210ENST00000560663 CHD1O14646 1710 aa29.02■■■□□ 2.24
MIR9-3HG-210ENST00000560663 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
MIR9-3HG-210ENST00000560663 CHMP7Q8WUX9 453 aaPredicted RBP29.01■■■□□ 2.23
MIR9-3HG-210ENST00000560663 KIF27Q86VH2 1401 aa28.98■■■□□ 2.23
MIR9-3HG-210ENST00000560663 TRIM41Q8WV44 630 aa28.97■■■□□ 2.23
MIR9-3HG-210ENST00000560663 IGF1RP08069 1367 aa28.97■■■□□ 2.23
MIR9-3HG-210ENST00000560663 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
MIR9-3HG-210ENST00000560663 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
MIR9-3HG-210ENST00000560663 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
MIR9-3HG-210ENST00000560663 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
MIR9-3HG-210ENST00000560663 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
MIR9-3HG-210ENST00000560663 NUP160Q12769 1436 aa28.8■■■□□ 2.2
MIR9-3HG-210ENST00000560663 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
MIR9-3HG-210ENST00000560663 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
MIR9-3HG-210ENST00000560663 ARHGEF11O15085 1522 aa28.73■■■□□ 2.19
MIR9-3HG-210ENST00000560663 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
MIR9-3HG-210ENST00000560663 CUL7Q14999 1698 aa28.69■■■□□ 2.18
MIR9-3HG-210ENST00000560663 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
MIR9-3HG-210ENST00000560663 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
MIR9-3HG-210ENST00000560663 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
MIR9-3HG-210ENST00000560663 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
MIR9-3HG-210ENST00000560663 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
MIR9-3HG-210ENST00000560663 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms