RNA–Protein interactions for RNA: ENST00000560642.1

MYO1E-209, Transcript of myosin IE, humanhuman

TSL 4

Gene MYO1E, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO1E-209ENST00000560642 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
MYO1E-209ENST00000560642 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
MYO1E-209ENST00000560642 ABCC9O60706 1549 aa31.38■■■□□ 2.61
MYO1E-209ENST00000560642 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
MYO1E-209ENST00000560642 NACADO15069 1562 aa29.75■■■□□ 2.35
MYO1E-209ENST00000560642 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
MYO1E-209ENST00000560642 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
MYO1E-209ENST00000560642 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
MYO1E-209ENST00000560642 ZCCHC6Q5VYS8 1495 aaKnown RBP29.24■■■□□ 2.27
MYO1E-209ENST00000560642 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
MYO1E-209ENST00000560642 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
MYO1E-209ENST00000560642 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
MYO1E-209ENST00000560642 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
MYO1E-209ENST00000560642 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
MYO1E-209ENST00000560642 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
MYO1E-209ENST00000560642 CC2D2AQ9P2K1 1620 aa28.38■■■□□ 2.13
MYO1E-209ENST00000560642 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
MYO1E-209ENST00000560642 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
MYO1E-209ENST00000560642 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
MYO1E-209ENST00000560642 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
MYO1E-209ENST00000560642 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
MYO1E-209ENST00000560642 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
MYO1E-209ENST00000560642 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
MYO1E-209ENST00000560642 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
MYO1E-209ENST00000560642 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
MYO1E-209ENST00000560642 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
MYO1E-209ENST00000560642 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
MYO1E-209ENST00000560642 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
MYO1E-209ENST00000560642 NESP48681 1621 aa27.02■■□□□ 1.92
MYO1E-209ENST00000560642 CUX2O14529 1486 aa26.96■■□□□ 1.91
MYO1E-209ENST00000560642 WIZO95785 1651 aa26.86■■□□□ 1.89
MYO1E-209ENST00000560642 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
MYO1E-209ENST00000560642 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
MYO1E-209ENST00000560642 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
MYO1E-209ENST00000560642 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
MYO1E-209ENST00000560642 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
MYO1E-209ENST00000560642 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
MYO1E-209ENST00000560642 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
MYO1E-209ENST00000560642 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
MYO1E-209ENST00000560642 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
MYO1E-209ENST00000560642 WDR62O43379 1518 aa26.39■■□□□ 1.82
MYO1E-209ENST00000560642 CFTRP13569 1480 aa26.36■■□□□ 1.81
MYO1E-209ENST00000560642 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
MYO1E-209ENST00000560642 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
MYO1E-209ENST00000560642 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
MYO1E-209ENST00000560642 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
MYO1E-209ENST00000560642 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
MYO1E-209ENST00000560642 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
MYO1E-209ENST00000560642 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
MYO1E-209ENST00000560642 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
MYO1E-209ENST00000560642 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
MYO1E-209ENST00000560642 ABCC8Q09428 1581 aa25.76■■□□□ 1.71
MYO1E-209ENST00000560642 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.71
MYO1E-209ENST00000560642 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
MYO1E-209ENST00000560642 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
MYO1E-209ENST00000560642 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
MYO1E-209ENST00000560642 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
MYO1E-209ENST00000560642 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
MYO1E-209ENST00000560642 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
MYO1E-209ENST00000560642 CHD1O14646 1710 aa25.5■■□□□ 1.67
MYO1E-209ENST00000560642 CUX1P39880 1505 aa25.5■■□□□ 1.67
MYO1E-209ENST00000560642 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
MYO1E-209ENST00000560642 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
MYO1E-209ENST00000560642 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
MYO1E-209ENST00000560642 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
MYO1E-209ENST00000560642 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
MYO1E-209ENST00000560642 SOGA1O94964 1423 aa25.44■■□□□ 1.66
MYO1E-209ENST00000560642 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
MYO1E-209ENST00000560642 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
MYO1E-209ENST00000560642 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
MYO1E-209ENST00000560642 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
MYO1E-209ENST00000560642 FBLN2P98095 1184 aa25.26■■□□□ 1.63
MYO1E-209ENST00000560642 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
MYO1E-209ENST00000560642 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
MYO1E-209ENST00000560642 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
MYO1E-209ENST00000560642 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
MYO1E-209ENST00000560642 ABCA10Q8WWZ4 1543 aa25.18■■□□□ 1.62
MYO1E-209ENST00000560642 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
MYO1E-209ENST00000560642 GAPVD1Q14C86 1478 aa25.17■■□□□ 1.62
MYO1E-209ENST00000560642 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
MYO1E-209ENST00000560642 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
MYO1E-209ENST00000560642 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
MYO1E-209ENST00000560642 SYNJ1O43426 1573 aa25.14■■□□□ 1.61
MYO1E-209ENST00000560642 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
MYO1E-209ENST00000560642 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
MYO1E-209ENST00000560642 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
MYO1E-209ENST00000560642 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
MYO1E-209ENST00000560642 ADAMTS12P58397 1594 aa25■■□□□ 1.59
MYO1E-209ENST00000560642 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
MYO1E-209ENST00000560642 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
MYO1E-209ENST00000560642 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
MYO1E-209ENST00000560642 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
MYO1E-209ENST00000560642 NUP160Q12769 1436 aa24.84■■□□□ 1.57
MYO1E-209ENST00000560642 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
MYO1E-209ENST00000560642 SHROOM2Q13796 1616 aa24.76■■□□□ 1.55
MYO1E-209ENST00000560642 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
MYO1E-209ENST00000560642 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
MYO1E-209ENST00000560642 CUL7Q14999 1698 aa24.58■■□□□ 1.53
MYO1E-209ENST00000560642 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
MYO1E-209ENST00000560642 PRG4Q92954 1404 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms