RNA–Protein interactions for RNA: ENST00000560567.5

TRIP4-210, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 5

Gene TRIP4, Length 1,536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-210ENST00000560567 NISCHQ9Y2I1 1504 aa47.47■■■■■ 5.19
TRIP4-210ENST00000560567 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
TRIP4-210ENST00000560567 ABCC9O60706 1549 aa42.24■■■■■ 4.35
TRIP4-210ENST00000560567 RB1CC1Q8TDY2 1594 aa40.3■■■■■ 4.04
TRIP4-210ENST00000560567 NACADO15069 1562 aa40.08■■■■■ 4.01
TRIP4-210ENST00000560567 DCAF8L2P0C7V8 631 aa39.84■■■■□ 3.97
TRIP4-210ENST00000560567 MYO15BQ96JP2 1530 aa39.61■■■■□ 3.93
TRIP4-210ENST00000560567 UNC13AQ9UPW8 1703 aa39.52■■■■□ 3.92
TRIP4-210ENST00000560567 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
TRIP4-210ENST00000560567 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
TRIP4-210ENST00000560567 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
TRIP4-210ENST00000560567 DCAF1Q9Y4B6 1507 aa39.21■■■■□ 3.87
TRIP4-210ENST00000560567 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
TRIP4-210ENST00000560567 SCRIBQ14160 1630 aa38.76■■■■□ 3.8
TRIP4-210ENST00000560567 SHROOM4Q9ULL8 1493 aa38.6■■■■□ 3.77
TRIP4-210ENST00000560567 CC2D2AQ9P2K1 1620 aa38.2■■■■□ 3.71
TRIP4-210ENST00000560567 EIF4G1Q04637 1599 aaKnown RBP38.17■■■■□ 3.7
TRIP4-210ENST00000560567 CECR2Q9BXF3 1484 aa38.01■■■■□ 3.67
TRIP4-210ENST00000560567 SMARCA4P51532 1647 aa37■■■■□ 3.51
TRIP4-210ENST00000560567 NCAPD3P42695 1498 aa37■■■■□ 3.51
TRIP4-210ENST00000560567 ATAD2BQ9ULI0 1458 aa36.94■■■■□ 3.5
TRIP4-210ENST00000560567 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
TRIP4-210ENST00000560567 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
TRIP4-210ENST00000560567 HMGXB3Q12766 1538 aa36.77■■■■□ 3.48
TRIP4-210ENST00000560567 PEG3Q9GZU2 1588 aa36.64■■■■□ 3.46
TRIP4-210ENST00000560567 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
TRIP4-210ENST00000560567 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
TRIP4-210ENST00000560567 ERCC6Q03468 1493 aa36.4■■■■□ 3.42
TRIP4-210ENST00000560567 NESP48681 1621 aa36.39■■■■□ 3.42
TRIP4-210ENST00000560567 CUX2O14529 1486 aa36.27■■■■□ 3.4
TRIP4-210ENST00000560567 WIZO95785 1651 aa36.2■■■■□ 3.39
TRIP4-210ENST00000560567 LAMC3Q9Y6N6 1575 aa36.14■■■■□ 3.38
TRIP4-210ENST00000560567 THOC2Q8NI27 1593 aaKnown RBP36■■■■□ 3.35
TRIP4-210ENST00000560567 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
TRIP4-210ENST00000560567 DNAJC5Q9H3Z4 198 aa35.93■■■■□ 3.34
TRIP4-210ENST00000560567 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
TRIP4-210ENST00000560567 CADPSQ9ULU8 1353 aa35.86■■■■□ 3.33
TRIP4-210ENST00000560567 PDS5BQ9NTI5 1447 aa35.86■■■■□ 3.33
TRIP4-210ENST00000560567 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
TRIP4-210ENST00000560567 MRC2Q9UBG0 1479 aa35.59■■■■□ 3.29
TRIP4-210ENST00000560567 CFTRP13569 1480 aa35.54■■■■□ 3.28
TRIP4-210ENST00000560567 WDR62O43379 1518 aa35.53■■■■□ 3.28
TRIP4-210ENST00000560567 CEP164Q9UPV0 1460 aa35.49■■■■□ 3.27
TRIP4-210ENST00000560567 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
TRIP4-210ENST00000560567 CCDC88BA6NC98 1476 aa35.3■■■■□ 3.24
TRIP4-210ENST00000560567 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
TRIP4-210ENST00000560567 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
TRIP4-210ENST00000560567 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
TRIP4-210ENST00000560567 IFT140Q96RY7 1462 aa34.76■■■■□ 3.16
TRIP4-210ENST00000560567 DNMBPQ6XZF7 1577 aa34.76■■■■□ 3.16
TRIP4-210ENST00000560567 ZNF608Q9ULD9 1512 aaPredicted RBP34.75■■■■□ 3.15
TRIP4-210ENST00000560567 ABCC8Q09428 1581 aa34.73■■■■□ 3.15
TRIP4-210ENST00000560567 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
TRIP4-210ENST00000560567 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
TRIP4-210ENST00000560567 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
TRIP4-210ENST00000560567 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
TRIP4-210ENST00000560567 TRIM41Q8WV44 630 aa34.45■■■■□ 3.11
TRIP4-210ENST00000560567 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.11e-6■□□□□ 11
TRIP4-210ENST00000560567 SUPT5HO00267 1087 aaKnown RBP34.43■■■■□ 3.1
TRIP4-210ENST00000560567 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
TRIP4-210ENST00000560567 CUX1P39880 1505 aa34.38■■■■□ 3.09
TRIP4-210ENST00000560567 FGD5Q6ZNL6 1462 aa34.34■■■■□ 3.09
TRIP4-210ENST00000560567 SOGA1O94964 1423 aa34.31■■■■□ 3.08
TRIP4-210ENST00000560567 CHD1O14646 1710 aa34.3■■■■□ 3.08
TRIP4-210ENST00000560567 RIMBP3CA6NJZ7 1639 aa34.24■■■■□ 3.07
TRIP4-210ENST00000560567 RIMBP3BA6NNM3 1639 aa34.24■■■■□ 3.07
TRIP4-210ENST00000560567 RIMBP3Q9UFD9 1639 aa34.24■■■■□ 3.07
TRIP4-210ENST00000560567 TDRD9Q8NDG6 1382 aaKnown RBP34.24■■■■□ 3.07
TRIP4-210ENST00000560567 WDR97A6NE52 1622 aa34.18■■■■□ 3.06
TRIP4-210ENST00000560567 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
TRIP4-210ENST00000560567 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
TRIP4-210ENST00000560567 FBLN2P98095 1184 aa34.07■■■■□ 3.04
TRIP4-210ENST00000560567 GRIN2BQ13224 1484 aa34■■■■□ 3.03
TRIP4-210ENST00000560567 MAGI1Q96QZ7 1491 aaPredicted RBP33.98■■■■□ 3.03
TRIP4-210ENST00000560567 PBRM1Q86U86 1689 aa33.98■■■■□ 3.03
TRIP4-210ENST00000560567 ABCA10Q8WWZ4 1543 aa33.95■■■■□ 3.03
TRIP4-210ENST00000560567 ABCA5Q8WWZ7 1642 aa33.94■■■■□ 3.02
TRIP4-210ENST00000560567 GAPVD1Q14C86 1478 aa33.92■■■■□ 3.02
TRIP4-210ENST00000560567 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
TRIP4-210ENST00000560567 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
TRIP4-210ENST00000560567 TOP2BQ02880 1626 aa33.88■■■■□ 3.01
TRIP4-210ENST00000560567 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
TRIP4-210ENST00000560567 SYNJ2O15056 1496 aa33.87■■■■□ 3.01
TRIP4-210ENST00000560567 CHMP7Q8WUX9 453 aaPredicted RBP33.85■■■■□ 3.01
TRIP4-210ENST00000560567 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
TRIP4-210ENST00000560567 ARAP1Q96P48 1450 aa33.83■■■■□ 3.01
TRIP4-210ENST00000560567 CYB5RLQ6IPT4 315 aa33.79■■■■□ 3
TRIP4-210ENST00000560567 ADAMTS12P58397 1594 aa33.65■■■□□ 2.98
TRIP4-210ENST00000560567 GRIN2AQ12879 1464 aa33.6■■■□□ 2.97
TRIP4-210ENST00000560567 ERICH3Q5RHP9 1530 aa33.52■■■□□ 2.96
TRIP4-210ENST00000560567 CEP170Q5SW79 1584 aa33.51■■■□□ 2.95
TRIP4-210ENST00000560567 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
TRIP4-210ENST00000560567 NUP160Q12769 1436 aa33.48■■■□□ 2.95
TRIP4-210ENST00000560567 ERCC6L2Q5T890 1561 aa33.41■■■□□ 2.94
TRIP4-210ENST00000560567 SHROOM2Q13796 1616 aa33.34■■■□□ 2.93
TRIP4-210ENST00000560567 TRHP20396 242 aaPredicted RBP33.29■■■□□ 2.92
TRIP4-210ENST00000560567 RUSC2Q8N2Y8 1516 aa33.19■■■□□ 2.9
TRIP4-210ENST00000560567 KIF27Q86VH2 1401 aa33.15■■■□□ 2.9
TRIP4-210ENST00000560567 IGF1RP08069 1367 aa33.14■■■□□ 2.9
TRIP4-210ENST00000560567 CUL7Q14999 1698 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms