RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
SPG21-211ENST00000560564 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
SPG21-211ENST00000560564 ABCC9O60706 1549 aa35.63■■■■□ 3.29
SPG21-211ENST00000560564 RB1CC1Q8TDY2 1594 aa34.11■■■■□ 3.05
SPG21-211ENST00000560564 NACADO15069 1562 aa33.98■■■■□ 3.03
SPG21-211ENST00000560564 MYO15BQ96JP2 1530 aa33.69■■■□□ 2.98
SPG21-211ENST00000560564 DCAF8L2P0C7V8 631 aa33.67■■■□□ 2.98
SPG21-211ENST00000560564 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
SPG21-211ENST00000560564 UNC13AQ9UPW8 1703 aa33.45■■■□□ 2.94
SPG21-211ENST00000560564 DCAF1Q9Y4B6 1507 aa33.39■■■□□ 2.94
SPG21-211ENST00000560564 BICRAQ9NZM4 1560 aa33.18■■■□□ 2.9
SPG21-211ENST00000560564 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
SPG21-211ENST00000560564 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
SPG21-211ENST00000560564 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
SPG21-211ENST00000560564 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
SPG21-211ENST00000560564 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
SPG21-211ENST00000560564 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
SPG21-211ENST00000560564 CECR2Q9BXF3 1484 aa32.07■■■□□ 2.72
SPG21-211ENST00000560564 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
SPG21-211ENST00000560564 NCAPD3P42695 1498 aa31.38■■■□□ 2.61
SPG21-211ENST00000560564 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
SPG21-211ENST00000560564 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
SPG21-211ENST00000560564 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
SPG21-211ENST00000560564 HMGXB3Q12766 1538 aa31.2■■■□□ 2.59
SPG21-211ENST00000560564 PEG3Q9GZU2 1588 aa31.15■■■□□ 2.58
SPG21-211ENST00000560564 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
SPG21-211ENST00000560564 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.55
SPG21-211ENST00000560564 NESP48681 1621 aa30.75■■■□□ 2.51
SPG21-211ENST00000560564 WIZO95785 1651 aa30.73■■■□□ 2.51
SPG21-211ENST00000560564 ERCC6Q03468 1493 aa30.7■■■□□ 2.5
SPG21-211ENST00000560564 LAMC3Q9Y6N6 1575 aa30.61■■■□□ 2.49
SPG21-211ENST00000560564 CUX2O14529 1486 aa30.58■■■□□ 2.49
SPG21-211ENST00000560564 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
SPG21-211ENST00000560564 THOC2Q8NI27 1593 aaKnown RBP30.42■■■□□ 2.46
SPG21-211ENST00000560564 KIF21AQ7Z4S6 1674 aa30.41■■■□□ 2.46
SPG21-211ENST00000560564 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
SPG21-211ENST00000560564 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
SPG21-211ENST00000560564 PDS5BQ9NTI5 1447 aa30.36■■■□□ 2.45
SPG21-211ENST00000560564 CFTRP13569 1480 aa30.17■■■□□ 2.42
SPG21-211ENST00000560564 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
SPG21-211ENST00000560564 MRC2Q9UBG0 1479 aa30.11■■■□□ 2.41
SPG21-211ENST00000560564 WDR62O43379 1518 aa30.07■■■□□ 2.4
SPG21-211ENST00000560564 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
SPG21-211ENST00000560564 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
SPG21-211ENST00000560564 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
SPG21-211ENST00000560564 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
SPG21-211ENST00000560564 URB2Q14146 1524 aaKnown RBP29.82■■■□□ 2.36
SPG21-211ENST00000560564 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
SPG21-211ENST00000560564 DNMBPQ6XZF7 1577 aa29.48■■■□□ 2.31
SPG21-211ENST00000560564 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
SPG21-211ENST00000560564 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
SPG21-211ENST00000560564 ZNF608Q9ULD9 1512 aaPredicted RBP29.38■■■□□ 2.29
SPG21-211ENST00000560564 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
SPG21-211ENST00000560564 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
SPG21-211ENST00000560564 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
SPG21-211ENST00000560564 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
SPG21-211ENST00000560564 CUX1P39880 1505 aa29.2■■■□□ 2.26
SPG21-211ENST00000560564 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
SPG21-211ENST00000560564 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.26
SPG21-211ENST00000560564 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
SPG21-211ENST00000560564 AQRO60306 1485 aaKnown RBP eCLIP29.12■■■□□ 2.25
SPG21-211ENST00000560564 SOGA1O94964 1423 aa29.09■■■□□ 2.25
SPG21-211ENST00000560564 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
SPG21-211ENST00000560564 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
SPG21-211ENST00000560564 CHD1O14646 1710 aa28.98■■■□□ 2.23
SPG21-211ENST00000560564 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
SPG21-211ENST00000560564 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
SPG21-211ENST00000560564 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
SPG21-211ENST00000560564 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
SPG21-211ENST00000560564 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
SPG21-211ENST00000560564 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
SPG21-211ENST00000560564 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
SPG21-211ENST00000560564 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
SPG21-211ENST00000560564 GRIN2BQ13224 1484 aa28.82■■■□□ 2.2
SPG21-211ENST00000560564 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
SPG21-211ENST00000560564 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
SPG21-211ENST00000560564 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
SPG21-211ENST00000560564 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
SPG21-211ENST00000560564 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
SPG21-211ENST00000560564 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
SPG21-211ENST00000560564 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
SPG21-211ENST00000560564 FBLN2P98095 1184 aa28.74■■■□□ 2.19
SPG21-211ENST00000560564 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
SPG21-211ENST00000560564 CLASP1Q7Z460 1538 aa28.67■■■□□ 2.18
SPG21-211ENST00000560564 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
SPG21-211ENST00000560564 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
SPG21-211ENST00000560564 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
SPG21-211ENST00000560564 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
SPG21-211ENST00000560564 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
SPG21-211ENST00000560564 CYB5RLQ6IPT4 315 aa28.45■■■□□ 2.14
SPG21-211ENST00000560564 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
SPG21-211ENST00000560564 NUP160Q12769 1436 aa28.39■■■□□ 2.14
SPG21-211ENST00000560564 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
SPG21-211ENST00000560564 SHROOM2Q13796 1616 aa28.26■■■□□ 2.11
SPG21-211ENST00000560564 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
SPG21-211ENST00000560564 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
SPG21-211ENST00000560564 IGF1RP08069 1367 aa28.18■■■□□ 2.1
SPG21-211ENST00000560564 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
SPG21-211ENST00000560564 CUL7Q14999 1698 aa28.14■■■□□ 2.1
SPG21-211ENST00000560564 PRG4Q92954 1404 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms