RNA–Protein interactions for RNA: ENST00000560529.1

AP3B2-213, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 3

Gene AP3B2, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-213ENST00000560529 NISCHQ9Y2I1 1504 aa47.33■■■■■ 5.17
AP3B2-213ENST00000560529 CCDC180Q9P1Z9 1646 aa42.14■■■■■ 4.34
AP3B2-213ENST00000560529 ABCC9O60706 1549 aa41.56■■■■■ 4.24
AP3B2-213ENST00000560529 RB1CC1Q8TDY2 1594 aa39.82■■■■□ 3.97
AP3B2-213ENST00000560529 DCAF8L2P0C7V8 631 aa39.73■■■■□ 3.95
AP3B2-213ENST00000560529 NACADO15069 1562 aa39.7■■■■□ 3.95
AP3B2-213ENST00000560529 ZCCHC6Q5VYS8 1495 aaKnown RBP39.38■■■■□ 3.9
AP3B2-213ENST00000560529 MYO15BQ96JP2 1530 aa39.36■■■■□ 3.89
AP3B2-213ENST00000560529 DCAF1Q9Y4B6 1507 aa39.11■■■■□ 3.85
AP3B2-213ENST00000560529 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
AP3B2-213ENST00000560529 PABPN1Q86U42 306 aaKnown RBP eCLIP38.81■■■■□ 3.8
AP3B2-213ENST00000560529 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
AP3B2-213ENST00000560529 SCRIBQ14160 1630 aa38.5■■■■□ 3.75
AP3B2-213ENST00000560529 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
AP3B2-213ENST00000560529 SHROOM4Q9ULL8 1493 aa38.17■■■■□ 3.7
AP3B2-213ENST00000560529 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.62
AP3B2-213ENST00000560529 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
AP3B2-213ENST00000560529 CECR2Q9BXF3 1484 aa37.35■■■■□ 3.57
AP3B2-213ENST00000560529 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
AP3B2-213ENST00000560529 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.47
AP3B2-213ENST00000560529 NCAPD3P42695 1498 aa36.65■■■■□ 3.46
AP3B2-213ENST00000560529 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
AP3B2-213ENST00000560529 SMARCA2P51531 1590 aa36.57■■■■□ 3.45
AP3B2-213ENST00000560529 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
AP3B2-213ENST00000560529 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
AP3B2-213ENST00000560529 PEG3Q9GZU2 1588 aa36.39■■■■□ 3.42
AP3B2-213ENST00000560529 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
AP3B2-213ENST00000560529 WIZO95785 1651 aa36.07■■■■□ 3.37
AP3B2-213ENST00000560529 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
AP3B2-213ENST00000560529 NESP48681 1621 aa35.88■■■■□ 3.33
AP3B2-213ENST00000560529 ERCC6Q03468 1493 aa35.84■■■■□ 3.33
AP3B2-213ENST00000560529 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
AP3B2-213ENST00000560529 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
AP3B2-213ENST00000560529 CADPSQ9ULU8 1353 aa35.59■■■■□ 3.29
AP3B2-213ENST00000560529 PDS5BQ9NTI5 1447 aa35.51■■■■□ 3.28
AP3B2-213ENST00000560529 CUX2O14529 1486 aa35.5■■■■□ 3.27
AP3B2-213ENST00000560529 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
AP3B2-213ENST00000560529 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
AP3B2-213ENST00000560529 CFTRP13569 1480 aa35.32■■■■□ 3.24
AP3B2-213ENST00000560529 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
AP3B2-213ENST00000560529 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
AP3B2-213ENST00000560529 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
AP3B2-213ENST00000560529 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
AP3B2-213ENST00000560529 WDR62O43379 1518 aa35.04■■■■□ 3.2
AP3B2-213ENST00000560529 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
AP3B2-213ENST00000560529 PRDM2Q13029 1718 aa34.95■■■■□ 3.18
AP3B2-213ENST00000560529 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
AP3B2-213ENST00000560529 DNAJC5Q9H3Z4 198 aa34.71■■■■□ 3.15
AP3B2-213ENST00000560529 TOPBP1Q92547 1522 aa34.59■■■■□ 3.13
AP3B2-213ENST00000560529 ABCC8Q09428 1581 aa34.54■■■■□ 3.12
AP3B2-213ENST00000560529 DNMBPQ6XZF7 1577 aa34.52■■■■□ 3.12
AP3B2-213ENST00000560529 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
AP3B2-213ENST00000560529 ZNF608Q9ULD9 1512 aaPredicted RBP34.32■■■■□ 3.08
AP3B2-213ENST00000560529 POLA1P09884 1462 aaPredicted RBP34.29■■■■□ 3.08
AP3B2-213ENST00000560529 CUX1P39880 1505 aa34.24■■■■□ 3.07
AP3B2-213ENST00000560529 TARBP1Q13395 1621 aaKnown RBP34.21■■■■□ 3.07
AP3B2-213ENST00000560529 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
AP3B2-213ENST00000560529 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
AP3B2-213ENST00000560529 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
AP3B2-213ENST00000560529 SOGA1O94964 1423 aa34.15■■■■□ 3.06
AP3B2-213ENST00000560529 AQRO60306 1485 aaKnown RBP eCLIP34.1■■■■□ 3.05
AP3B2-213ENST00000560529 OSCARQ8IYS5 282 aa34.02■■■■□ 3.04
AP3B2-213ENST00000560529 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
AP3B2-213ENST00000560529 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
AP3B2-213ENST00000560529 WDR97A6NE52 1622 aa33.9■■■■□ 3.02
AP3B2-213ENST00000560529 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
AP3B2-213ENST00000560529 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
AP3B2-213ENST00000560529 BIVM-ERCC5R4GMW8 1640 aa33.85■■■■□ 3.01
AP3B2-213ENST00000560529 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
AP3B2-213ENST00000560529 FBLN2P98095 1184 aa33.78■■■■□ 3
AP3B2-213ENST00000560529 GRIN2BQ13224 1484 aa33.77■■■■□ 3
AP3B2-213ENST00000560529 SNAPC4Q5SXM2 1469 aa33.77■■■■□ 3
AP3B2-213ENST00000560529 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
AP3B2-213ENST00000560529 CHD1O14646 1710 aa33.73■■■□□ 2.99
AP3B2-213ENST00000560529 MAGI1Q96QZ7 1491 aaPredicted RBP33.69■■■□□ 2.98
AP3B2-213ENST00000560529 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
AP3B2-213ENST00000560529 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
AP3B2-213ENST00000560529 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
AP3B2-213ENST00000560529 SYNJ2O15056 1496 aa33.57■■■□□ 2.97
AP3B2-213ENST00000560529 TRIM41Q8WV44 630 aa33.54■■■□□ 2.96
AP3B2-213ENST00000560529 RIMBP3CA6NJZ7 1639 aa33.48■■■□□ 2.95
AP3B2-213ENST00000560529 RIMBP3BA6NNM3 1639 aa33.48■■■□□ 2.95
AP3B2-213ENST00000560529 RIMBP3Q9UFD9 1639 aa33.48■■■□□ 2.95
AP3B2-213ENST00000560529 ARHGEF11O15085 1522 aa33.47■■■□□ 2.95
AP3B2-213ENST00000560529 ADAMTS12P58397 1594 aa33.4■■■□□ 2.94
AP3B2-213ENST00000560529 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
AP3B2-213ENST00000560529 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
AP3B2-213ENST00000560529 FHAD1B1AJZ9 1412 aa33.35■■■□□ 2.93
AP3B2-213ENST00000560529 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
AP3B2-213ENST00000560529 KIF27Q86VH2 1401 aa33.26■■■□□ 2.91
AP3B2-213ENST00000560529 CYB5RLQ6IPT4 315 aa33.2■■■□□ 2.91
AP3B2-213ENST00000560529 NUP160Q12769 1436 aa33.19■■■□□ 2.9
AP3B2-213ENST00000560529 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
AP3B2-213ENST00000560529 CEP170Q5SW79 1584 aa33.17■■■□□ 2.9
AP3B2-213ENST00000560529 IGF1RP08069 1367 aa33.14■■■□□ 2.9
AP3B2-213ENST00000560529 CUL7Q14999 1698 aa33.04■■■□□ 2.88
AP3B2-213ENST00000560529 CARMIL1Q5VZK9 1371 aa32.95■■■□□ 2.86
AP3B2-213ENST00000560529 SHROOM2Q13796 1616 aa32.94■■■□□ 2.86
AP3B2-213ENST00000560529 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
AP3B2-213ENST00000560529 RUSC2Q8N2Y8 1516 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms