RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
CHRNB4-205ENST00000560511 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
CHRNB4-205ENST00000560511 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
CHRNB4-205ENST00000560511 ABCC9O60706 1549 aa19.14■□□□□ 0.65
CHRNB4-205ENST00000560511 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
CHRNB4-205ENST00000560511 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
CHRNB4-205ENST00000560511 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
CHRNB4-205ENST00000560511 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
CHRNB4-205ENST00000560511 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHRNB4-205ENST00000560511 NACADO15069 1562 aa17.79■□□□□ 0.44
CHRNB4-205ENST00000560511 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
CHRNB4-205ENST00000560511 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
CHRNB4-205ENST00000560511 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
CHRNB4-205ENST00000560511 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
CHRNB4-205ENST00000560511 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
CHRNB4-205ENST00000560511 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
CHRNB4-205ENST00000560511 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
CHRNB4-205ENST00000560511 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
CHRNB4-205ENST00000560511 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
CHRNB4-205ENST00000560511 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
CHRNB4-205ENST00000560511 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
CHRNB4-205ENST00000560511 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
CHRNB4-205ENST00000560511 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
CHRNB4-205ENST00000560511 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
CHRNB4-205ENST00000560511 CUX2O14529 1486 aa16.56■□□□□ 0.24
CHRNB4-205ENST00000560511 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
CHRNB4-205ENST00000560511 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
CHRNB4-205ENST00000560511 FOXD1Q16676 465 aa16.37■□□□□ 0.21
CHRNB4-205ENST00000560511 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CHRNB4-205ENST00000560511 NESP48681 1621 aa16.34■□□□□ 0.21
CHRNB4-205ENST00000560511 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
CHRNB4-205ENST00000560511 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
CHRNB4-205ENST00000560511 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
CHRNB4-205ENST00000560511 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
CHRNB4-205ENST00000560511 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
CHRNB4-205ENST00000560511 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
CHRNB4-205ENST00000560511 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
CHRNB4-205ENST00000560511 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
CHRNB4-205ENST00000560511 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
CHRNB4-205ENST00000560511 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
CHRNB4-205ENST00000560511 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
CHRNB4-205ENST00000560511 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
CHRNB4-205ENST00000560511 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
CHRNB4-205ENST00000560511 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
CHRNB4-205ENST00000560511 WDR62O43379 1518 aa15.87■□□□□ 0.13
CHRNB4-205ENST00000560511 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
CHRNB4-205ENST00000560511 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
CHRNB4-205ENST00000560511 WIZO95785 1651 aa15.79■□□□□ 0.12
CHRNB4-205ENST00000560511 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
CHRNB4-205ENST00000560511 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
CHRNB4-205ENST00000560511 CFTRP13569 1480 aa15.66■□□□□ 0.1
CHRNB4-205ENST00000560511 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
CHRNB4-205ENST00000560511 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
CHRNB4-205ENST00000560511 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
CHRNB4-205ENST00000560511 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
CHRNB4-205ENST00000560511 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
CHRNB4-205ENST00000560511 ADRA2BP18089 450 aa15.6■□□□□ 0.09
CHRNB4-205ENST00000560511 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.09
CHRNB4-205ENST00000560511 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
CHRNB4-205ENST00000560511 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
CHRNB4-205ENST00000560511 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
CHRNB4-205ENST00000560511 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
CHRNB4-205ENST00000560511 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
CHRNB4-205ENST00000560511 FBLN2P98095 1184 aa15.45■□□□□ 0.06
CHRNB4-205ENST00000560511 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
CHRNB4-205ENST00000560511 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
CHRNB4-205ENST00000560511 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
CHRNB4-205ENST00000560511 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
CHRNB4-205ENST00000560511 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
CHRNB4-205ENST00000560511 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHRNB4-205ENST00000560511 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
CHRNB4-205ENST00000560511 CHD1O14646 1710 aa15.35■□□□□ 0.05
CHRNB4-205ENST00000560511 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
CHRNB4-205ENST00000560511 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
CHRNB4-205ENST00000560511 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
CHRNB4-205ENST00000560511 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-205ENST00000560511 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-205ENST00000560511 MSH5O43196 834 aa15.25■□□□□ 0.03
CHRNB4-205ENST00000560511 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
CHRNB4-205ENST00000560511 CHMP7Q8WUX9 453 aaPredicted RBP15.24■□□□□ 0.03
CHRNB4-205ENST00000560511 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
CHRNB4-205ENST00000560511 SOGA1O94964 1423 aa15.22■□□□□ 0.03
CHRNB4-205ENST00000560511 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
CHRNB4-205ENST00000560511 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
CHRNB4-205ENST00000560511 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
CHRNB4-205ENST00000560511 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CHRNB4-205ENST00000560511 MAGI1Q96QZ7 1491 aaPredicted RBP15.1■□□□□ 0.01
CHRNB4-205ENST00000560511 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CHRNB4-205ENST00000560511 SYNJ2O15056 1496 aa15.07■□□□□ 0
CHRNB4-205ENST00000560511 WDR97A6NE52 1622 aa15.06■□□□□ 0
CHRNB4-205ENST00000560511 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
CHRNB4-205ENST00000560511 CUX1P39880 1505 aa15.03■□□□□ -0
CHRNB4-205ENST00000560511 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
CHRNB4-205ENST00000560511 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
CHRNB4-205ENST00000560511 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
CHRNB4-205ENST00000560511 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
CHRNB4-205ENST00000560511 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
CHRNB4-205ENST00000560511 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
CHRNB4-205ENST00000560511 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
CHRNB4-205ENST00000560511 NUP160Q12769 1436 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms