RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.2
HMG20A-210ENST00000560498 ABCC9O60706 1549 aa36.98■■■■□ 3.51
HMG20A-210ENST00000560498 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
HMG20A-210ENST00000560498 DNAJC5BQ9UF47 199 aa35.53■■■■□ 3.28
HMG20A-210ENST00000560498 RB1CC1Q8TDY2 1594 aa34.95■■■■□ 3.18
HMG20A-210ENST00000560498 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
HMG20A-210ENST00000560498 NACADO15069 1562 aa34.79■■■■□ 3.16
HMG20A-210ENST00000560498 MYO15BQ96JP2 1530 aa34.37■■■■□ 3.09
HMG20A-210ENST00000560498 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
HMG20A-210ENST00000560498 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
HMG20A-210ENST00000560498 UNC13AQ9UPW8 1703 aa34.14■■■■□ 3.06
HMG20A-210ENST00000560498 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
HMG20A-210ENST00000560498 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
HMG20A-210ENST00000560498 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
HMG20A-210ENST00000560498 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
HMG20A-210ENST00000560498 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
HMG20A-210ENST00000560498 CC2D2AQ9P2K1 1620 aa33.34■■■□□ 2.93
HMG20A-210ENST00000560498 DNAJC5Q9H3Z4 198 aa33.22■■■□□ 2.91
HMG20A-210ENST00000560498 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
HMG20A-210ENST00000560498 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
HMG20A-210ENST00000560498 CUX2O14529 1486 aa32.16■■■□□ 2.74
HMG20A-210ENST00000560498 ATAD2BQ9ULI0 1458 aa32.11■■■□□ 2.73
HMG20A-210ENST00000560498 SMARCA4P51532 1647 aa32.1■■■□□ 2.73
HMG20A-210ENST00000560498 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
HMG20A-210ENST00000560498 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
HMG20A-210ENST00000560498 ERCC6Q03468 1493 aa31.96■■■□□ 2.71
HMG20A-210ENST00000560498 HMGXB3Q12766 1538 aa31.88■■■□□ 2.69
HMG20A-210ENST00000560498 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
HMG20A-210ENST00000560498 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
HMG20A-210ENST00000560498 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
HMG20A-210ENST00000560498 NESP48681 1621 aa31.62■■■□□ 2.65
HMG20A-210ENST00000560498 TRIM41Q8WV44 630 aa31.47■■■□□ 2.63
HMG20A-210ENST00000560498 WIZO95785 1651 aa31.44■■■□□ 2.62
HMG20A-210ENST00000560498 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
HMG20A-210ENST00000560498 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
HMG20A-210ENST00000560498 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
HMG20A-210ENST00000560498 CADPSQ9ULU8 1353 aa31.22■■■□□ 2.59
HMG20A-210ENST00000560498 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
HMG20A-210ENST00000560498 KIF21AQ7Z4S6 1674 aa31.12■■■□□ 2.57
HMG20A-210ENST00000560498 TOP2AP11388 1531 aaKnown RBP31.02■■■□□ 2.56
HMG20A-210ENST00000560498 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
HMG20A-210ENST00000560498 CFTRP13569 1480 aa30.89■■■□□ 2.54
HMG20A-210ENST00000560498 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
HMG20A-210ENST00000560498 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.53
HMG20A-210ENST00000560498 WDR62O43379 1518 aa30.8■■■□□ 2.52
HMG20A-210ENST00000560498 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
HMG20A-210ENST00000560498 URB2Q14146 1524 aaKnown RBP30.59■■■□□ 2.49
HMG20A-210ENST00000560498 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
HMG20A-210ENST00000560498 PRDM2Q13029 1718 aa30.47■■■□□ 2.47
HMG20A-210ENST00000560498 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
HMG20A-210ENST00000560498 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
HMG20A-210ENST00000560498 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
HMG20A-210ENST00000560498 TOPBP1Q92547 1522 aa30.28■■■□□ 2.44
HMG20A-210ENST00000560498 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
HMG20A-210ENST00000560498 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
HMG20A-210ENST00000560498 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
HMG20A-210ENST00000560498 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
HMG20A-210ENST00000560498 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
HMG20A-210ENST00000560498 ARHGEF11O15085 1522 aa30.1■■■□□ 2.41
HMG20A-210ENST00000560498 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
HMG20A-210ENST00000560498 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
HMG20A-210ENST00000560498 TARBP1Q13395 1621 aaKnown RBP29.97■■■□□ 2.39
HMG20A-210ENST00000560498 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.39
HMG20A-210ENST00000560498 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
HMG20A-210ENST00000560498 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
HMG20A-210ENST00000560498 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
HMG20A-210ENST00000560498 SOGA1O94964 1423 aa29.89■■■□□ 2.38
HMG20A-210ENST00000560498 CUX1P39880 1505 aa29.87■■■□□ 2.37
HMG20A-210ENST00000560498 FGD5Q6ZNL6 1462 aa29.85■■■□□ 2.37
HMG20A-210ENST00000560498 TDRD9Q8NDG6 1382 aaKnown RBP29.84■■■□□ 2.37
HMG20A-210ENST00000560498 ARAP1Q96P48 1450 aa29.75■■■□□ 2.35
HMG20A-210ENST00000560498 FBLN2P98095 1184 aa29.74■■■□□ 2.35
HMG20A-210ENST00000560498 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
HMG20A-210ENST00000560498 CHD1O14646 1710 aa29.7■■■□□ 2.34
HMG20A-210ENST00000560498 SNAPC4Q5SXM2 1469 aa29.62■■■□□ 2.33
HMG20A-210ENST00000560498 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
HMG20A-210ENST00000560498 GRIN2BQ13224 1484 aa29.56■■■□□ 2.32
HMG20A-210ENST00000560498 CHMP7Q8WUX9 453 aaPredicted RBP29.53■■■□□ 2.32
HMG20A-210ENST00000560498 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
HMG20A-210ENST00000560498 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.31
HMG20A-210ENST00000560498 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
HMG20A-210ENST00000560498 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
HMG20A-210ENST00000560498 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
HMG20A-210ENST00000560498 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
HMG20A-210ENST00000560498 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
HMG20A-210ENST00000560498 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
HMG20A-210ENST00000560498 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
HMG20A-210ENST00000560498 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
HMG20A-210ENST00000560498 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
HMG20A-210ENST00000560498 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
HMG20A-210ENST00000560498 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
HMG20A-210ENST00000560498 FHAD1B1AJZ9 1412 aa29.14■■■□□ 2.26
HMG20A-210ENST00000560498 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
HMG20A-210ENST00000560498 NUP160Q12769 1436 aa29.09■■■□□ 2.25
HMG20A-210ENST00000560498 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
HMG20A-210ENST00000560498 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
HMG20A-210ENST00000560498 IGF1RP08069 1367 aa28.91■■■□□ 2.22
HMG20A-210ENST00000560498 KIF27Q86VH2 1401 aa28.88■■■□□ 2.21
HMG20A-210ENST00000560498 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
HMG20A-210ENST00000560498 JPH4Q96JJ6 628 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms