RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 NISCHQ9Y2I1 1504 aa50.86■■■■■ 5.73
PBX1-218ENST00000560469 CCDC180Q9P1Z9 1646 aa44.37■■■■■ 4.69
PBX1-218ENST00000560469 ZCCHC6Q5VYS8 1495 aaKnown RBP42.74■■■■■ 4.43
PBX1-218ENST00000560469 DCAF1Q9Y4B6 1507 aa42.11■■■■■ 4.33
PBX1-218ENST00000560469 DCAF8L2P0C7V8 631 aa41.91■■■■■ 4.3
PBX1-218ENST00000560469 ABCC9O60706 1549 aa41.79■■■■■ 4.28
PBX1-218ENST00000560469 MYO15BQ96JP2 1530 aa41.6■■■■■ 4.25
PBX1-218ENST00000560469 SHROOM4Q9ULL8 1493 aa41.44■■■■■ 4.22
PBX1-218ENST00000560469 NACADO15069 1562 aa41.3■■■■■ 4.2
PBX1-218ENST00000560469 RB1CC1Q8TDY2 1594 aa40.92■■■■■ 4.14
PBX1-218ENST00000560469 SCRIBQ14160 1630 aa40.73■■■■■ 4.11
PBX1-218ENST00000560469 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
PBX1-218ENST00000560469 SUPT5HO00267 1087 aaKnown RBP39.93■■■■□ 3.98
PBX1-218ENST00000560469 BICRAQ9NZM4 1560 aa39.63■■■■□ 3.94
PBX1-218ENST00000560469 RSF1Q96T23 1441 aaPredicted RBP39.46■■■■□ 3.91
PBX1-218ENST00000560469 CECR2Q9BXF3 1484 aa39.46■■■■□ 3.91
PBX1-218ENST00000560469 PABPN1Q86U42 306 aaKnown RBP eCLIP39.4■■■■□ 3.9
PBX1-218ENST00000560469 BAZ1AQ9NRL2 1556 aaPredicted RBP39.3■■■■□ 3.88
PBX1-218ENST00000560469 MROH2BQ7Z745 1585 aa39.26■■■■□ 3.88
PBX1-218ENST00000560469 SMARCA4P51532 1647 aa39.08■■■■□ 3.85
PBX1-218ENST00000560469 WIZO95785 1651 aa38.95■■■■□ 3.83
PBX1-218ENST00000560469 PEG3Q9GZU2 1588 aa38.64■■■■□ 3.78
PBX1-218ENST00000560469 TOP2AP11388 1531 aaKnown RBP38.59■■■■□ 3.77
PBX1-218ENST00000560469 EIF4G1Q04637 1599 aaKnown RBP38.45■■■■□ 3.75
PBX1-218ENST00000560469 SMARCA2P51531 1590 aa38.44■■■■□ 3.74
PBX1-218ENST00000560469 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
PBX1-218ENST00000560469 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
PBX1-218ENST00000560469 BAZ1BQ9UIG0 1483 aaKnown RBP38.22■■■■□ 3.71
PBX1-218ENST00000560469 CCDC88BA6NC98 1476 aa38.17■■■■□ 3.7
PBX1-218ENST00000560469 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
PBX1-218ENST00000560469 HMGXB3Q12766 1538 aa38.07■■■■□ 3.68
PBX1-218ENST00000560469 CC2D2AQ9P2K1 1620 aa37.86■■■■□ 3.65
PBX1-218ENST00000560469 TRIM41Q8WV44 630 aa37.6■■■■□ 3.61
PBX1-218ENST00000560469 ABCC8Q09428 1581 aa37.35■■■■□ 3.57
PBX1-218ENST00000560469 CFTRP13569 1480 aa37.26■■■■□ 3.56
PBX1-218ENST00000560469 WRNQ14191 1432 aaPredicted RBP eCLIP37.16■■■■□ 3.549e-6■■■■■ 50.1
PBX1-218ENST00000560469 CADPSQ9ULU8 1353 aa37.12■■■■□ 3.53
PBX1-218ENST00000560469 PRDM2Q13029 1718 aa37.12■■■■□ 3.53
PBX1-218ENST00000560469 SYNJ1O43426 1573 aa36.98■■■■□ 3.51
PBX1-218ENST00000560469 TOP2BQ02880 1626 aa36.87■■■■□ 3.49
PBX1-218ENST00000560469 FAM9AQ8IZU1 332 aaPredicted RBP36.83■■■■□ 3.49
PBX1-218ENST00000560469 BIVM-ERCC5R4GMW8 1640 aa36.83■■■■□ 3.49
PBX1-218ENST00000560469 LAMC3Q9Y6N6 1575 aa36.81■■■■□ 3.48
PBX1-218ENST00000560469 LOC105371045A0A1W2PR82 267 aa36.78■■■■□ 3.48
PBX1-218ENST00000560469 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.47
PBX1-218ENST00000560469 EEA1Q15075 1411 aa36.73■■■■□ 3.47
PBX1-218ENST00000560469 CUX1P39880 1505 aa36.71■■■■□ 3.47
PBX1-218ENST00000560469 NESP48681 1621 aa36.7■■■■□ 3.47
PBX1-218ENST00000560469 FANCD2Q9BXW9 1451 aa36.7■■■■□ 3.46
PBX1-218ENST00000560469 SOGA1O94964 1423 aa36.67■■■■□ 3.46
PBX1-218ENST00000560469 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
PBX1-218ENST00000560469 RUSC2Q8N2Y8 1516 aa36.51■■■■□ 3.44
PBX1-218ENST00000560469 CEP164Q9UPV0 1460 aa36.47■■■■□ 3.43
PBX1-218ENST00000560469 CSRNP3Q8WYN3 585 aa36.46■■■■□ 3.43
PBX1-218ENST00000560469 DNMBPQ6XZF7 1577 aa36.41■■■■□ 3.42
PBX1-218ENST00000560469 FGD5Q6ZNL6 1462 aa36.31■■■■□ 3.4
PBX1-218ENST00000560469 TOPBP1Q92547 1522 aa36.31■■■■□ 3.4
PBX1-218ENST00000560469 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
PBX1-218ENST00000560469 EHMT2Q96KQ7 1210 aa36.26■■■■□ 3.4
PBX1-218ENST00000560469 KIF27Q86VH2 1401 aa36.23■■■■□ 3.39
PBX1-218ENST00000560469 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
PBX1-218ENST00000560469 KIF21BO75037 1637 aa36.21■■■■□ 3.39
PBX1-218ENST00000560469 GOLGA3Q08378 1498 aa36.18■■■■□ 3.38
PBX1-218ENST00000560469 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
PBX1-218ENST00000560469 CUX2O14529 1486 aa36.1■■■■□ 3.37
PBX1-218ENST00000560469 TNIKQ9UKE5 1360 aa36.08■■■■□ 3.37
PBX1-218ENST00000560469 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
PBX1-218ENST00000560469 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
PBX1-218ENST00000560469 PRXQ9BXM0 1461 aa35.99■■■■□ 3.35
PBX1-218ENST00000560469 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
PBX1-218ENST00000560469 UBTFP17480 764 aaKnown RBP35.98■■■■□ 3.35
PBX1-218ENST00000560469 ERICH3Q5RHP9 1530 aa35.97■■■■□ 3.35
PBX1-218ENST00000560469 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
PBX1-218ENST00000560469 WDR97A6NE52 1622 aa35.89■■■■□ 3.34
PBX1-218ENST00000560469 IGF1RP08069 1367 aa35.88■■■■□ 3.33
PBX1-218ENST00000560469 ERCC6Q03468 1493 aa35.87■■■■□ 3.33
PBX1-218ENST00000560469 CEP162Q5TB80 1403 aa35.87■■■■□ 3.33
PBX1-218ENST00000560469 WDR62O43379 1518 aa35.84■■■■□ 3.33
PBX1-218ENST00000560469 TARBP1Q13395 1621 aaKnown RBP35.76■■■■□ 3.32
PBX1-218ENST00000560469 ABCA5Q8WWZ7 1642 aa35.72■■■■□ 3.31
PBX1-218ENST00000560469 CARMIL1Q5VZK9 1371 aa35.71■■■■□ 3.31
PBX1-218ENST00000560469 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.3
PBX1-218ENST00000560469 CUL7Q14999 1698 aa35.65■■■■□ 3.3
PBX1-218ENST00000560469 GAPVD1Q14C86 1478 aa35.64■■■■□ 3.3
PBX1-218ENST00000560469 TDRD9Q8NDG6 1382 aaKnown RBP35.63■■■■□ 3.29
PBX1-218ENST00000560469 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
PBX1-218ENST00000560469 CLIP1P30622 1438 aa35.59■■■■□ 3.29
PBX1-218ENST00000560469 PBRM1Q86U86 1689 aa35.44■■■■□ 3.26
PBX1-218ENST00000560469 AQRO60306 1485 aaKnown RBP eCLIP35.39■■■■□ 3.26
PBX1-218ENST00000560469 GRIN2BQ13224 1484 aa35.36■■■■□ 3.25
PBX1-218ENST00000560469 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
PBX1-218ENST00000560469 RANGAP1P46060 587 aaPredicted RBP35.3■■■■□ 3.24
PBX1-218ENST00000560469 VPS8Q8N3P4 1428 aa35.29■■■■□ 3.24
PBX1-218ENST00000560469 FHAD1B1AJZ9 1412 aa35.27■■■■□ 3.24
PBX1-218ENST00000560469 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
PBX1-218ENST00000560469 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
PBX1-218ENST00000560469 CTTNBP2Q8WZ74 1663 aa35.25■■■■□ 3.23
PBX1-218ENST00000560469 TRIM26Q12899 539 aaPredicted RBP35.24■■■■□ 3.23
PBX1-218ENST00000560469 ARAP1Q96P48 1450 aa35.21■■■■□ 3.23
PBX1-218ENST00000560469 ARHGAP35Q9NRY4 1499 aa35.2■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms