RNA–Protein interactions for RNA: ENST00000560454.1

IREB2-209, Transcript of iron responsive element binding protein 2, humanhuman

TSL 5

Gene IREB2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IREB2-209ENST00000560454 NISCHQ9Y2I1 1504 aa47.36■■■■■ 5.17
IREB2-209ENST00000560454 ABCC9O60706 1549 aa42.52■■■■■ 4.4
IREB2-209ENST00000560454 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
IREB2-209ENST00000560454 RB1CC1Q8TDY2 1594 aa40.44■■■■■ 4.06
IREB2-209ENST00000560454 NACADO15069 1562 aa40.18■■■■■ 4.02
IREB2-209ENST00000560454 DCAF8L2P0C7V8 631 aa40.12■■■■■ 4.01
IREB2-209ENST00000560454 DNAJC5BQ9UF47 199 aa39.99■■■■□ 3.99
IREB2-209ENST00000560454 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
IREB2-209ENST00000560454 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
IREB2-209ENST00000560454 UNC13AQ9UPW8 1703 aa39.35■■■■□ 3.89
IREB2-209ENST00000560454 BICRAQ9NZM4 1560 aa39.23■■■■□ 3.87
IREB2-209ENST00000560454 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
IREB2-209ENST00000560454 DCAF1Q9Y4B6 1507 aa39.13■■■■□ 3.85
IREB2-209ENST00000560454 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
IREB2-209ENST00000560454 SCRIBQ14160 1630 aa38.65■■■■□ 3.78
IREB2-209ENST00000560454 CC2D2AQ9P2K1 1620 aa38.36■■■■□ 3.73
IREB2-209ENST00000560454 CECR2Q9BXF3 1484 aa38.34■■■■□ 3.73
IREB2-209ENST00000560454 EIF4G1Q04637 1599 aaKnown RBP38.3■■■■□ 3.72
IREB2-209ENST00000560454 NCAPD3P42695 1498 aa37.16■■■■□ 3.54
IREB2-209ENST00000560454 ATAD2BQ9ULI0 1458 aa37.01■■■■□ 3.52
IREB2-209ENST00000560454 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
IREB2-209ENST00000560454 SMARCA4P51532 1647 aa36.88■■■■□ 3.49
IREB2-209ENST00000560454 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
IREB2-209ENST00000560454 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
IREB2-209ENST00000560454 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
IREB2-209ENST00000560454 ERCC6Q03468 1493 aa36.75■■■■□ 3.47
IREB2-209ENST00000560454 CUX2O14529 1486 aa36.69■■■■□ 3.46
IREB2-209ENST00000560454 BAZ1BQ9UIG0 1483 aaKnown RBP36.63■■■■□ 3.45
IREB2-209ENST00000560454 PEG3Q9GZU2 1588 aa36.55■■■■□ 3.44
IREB2-209ENST00000560454 NESP48681 1621 aa36.51■■■■□ 3.43
IREB2-209ENST00000560454 MROH2BQ7Z745 1585 aa36.47■■■■□ 3.43
IREB2-209ENST00000560454 LAMC3Q9Y6N6 1575 aa36.25■■■■□ 3.39
IREB2-209ENST00000560454 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
IREB2-209ENST00000560454 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
IREB2-209ENST00000560454 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
IREB2-209ENST00000560454 WIZO95785 1651 aa35.97■■■■□ 3.35
IREB2-209ENST00000560454 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
IREB2-209ENST00000560454 RSF1Q96T23 1441 aaPredicted RBP35.76■■■■□ 3.32
IREB2-209ENST00000560454 MRC2Q9UBG0 1479 aa35.76■■■■□ 3.32
IREB2-209ENST00000560454 WDR62O43379 1518 aa35.63■■■■□ 3.29
IREB2-209ENST00000560454 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
IREB2-209ENST00000560454 CFTRP13569 1480 aa35.6■■■■□ 3.29
IREB2-209ENST00000560454 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
IREB2-209ENST00000560454 TOP2AP11388 1531 aaKnown RBP35.56■■■■□ 3.28
IREB2-209ENST00000560454 URB2Q14146 1524 aaKnown RBP35.26■■■■□ 3.23
IREB2-209ENST00000560454 CCDC88BA6NC98 1476 aa35.22■■■■□ 3.23
IREB2-209ENST00000560454 TRIM41Q8WV44 630 aa35.13■■■■□ 3.21
IREB2-209ENST00000560454 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
IREB2-209ENST00000560454 PRDM2Q13029 1718 aa35.01■■■■□ 3.19
IREB2-209ENST00000560454 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
IREB2-209ENST00000560454 TOPBP1Q92547 1522 aa34.88■■■■□ 3.17
IREB2-209ENST00000560454 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
IREB2-209ENST00000560454 ZNF608Q9ULD9 1512 aaPredicted RBP34.84■■■■□ 3.17
IREB2-209ENST00000560454 DNMBPQ6XZF7 1577 aa34.73■■■■□ 3.15
IREB2-209ENST00000560454 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.12
IREB2-209ENST00000560454 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.12
IREB2-209ENST00000560454 POLA1P09884 1462 aaPredicted RBP34.53■■■■□ 3.12
IREB2-209ENST00000560454 TARBP1Q13395 1621 aaKnown RBP34.52■■■■□ 3.12
IREB2-209ENST00000560454 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
IREB2-209ENST00000560454 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
IREB2-209ENST00000560454 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
IREB2-209ENST00000560454 SOGA1O94964 1423 aa34.45■■■■□ 3.11
IREB2-209ENST00000560454 RAD54L2Q9Y4B4 1467 aa34.42■■■■□ 3.1
IREB2-209ENST00000560454 ARHGEF11O15085 1522 aa34.41■■■■□ 3.1
IREB2-209ENST00000560454 FBLN2P98095 1184 aa34.41■■■■□ 3.1
IREB2-209ENST00000560454 TDRD9Q8NDG6 1382 aaKnown RBP34.37■■■■□ 3.09
IREB2-209ENST00000560454 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
IREB2-209ENST00000560454 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
IREB2-209ENST00000560454 CHD1O14646 1710 aa34.26■■■■□ 3.07
IREB2-209ENST00000560454 CUX1P39880 1505 aa34.25■■■■□ 3.07
IREB2-209ENST00000560454 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
IREB2-209ENST00000560454 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
IREB2-209ENST00000560454 SNAPC4Q5SXM2 1469 aa34.17■■■■□ 3.06
IREB2-209ENST00000560454 CHMP7Q8WUX9 453 aaPredicted RBP34.17■■■■□ 3.06
IREB2-209ENST00000560454 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
IREB2-209ENST00000560454 MAGI1Q96QZ7 1491 aaPredicted RBP34.1■■■■□ 3.05
IREB2-209ENST00000560454 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
IREB2-209ENST00000560454 SYNJ2O15056 1496 aa34■■■■□ 3.03
IREB2-209ENST00000560454 GAPVD1Q14C86 1478 aa33.99■■■■□ 3.03
IREB2-209ENST00000560454 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
IREB2-209ENST00000560454 CLASP1Q7Z460 1538 aa33.96■■■■□ 3.03
IREB2-209ENST00000560454 ABCA10Q8WWZ4 1543 aa33.94■■■■□ 3.02
IREB2-209ENST00000560454 TRHP20396 242 aaPredicted RBP33.91■■■■□ 3.02
IREB2-209ENST00000560454 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
IREB2-209ENST00000560454 PBRM1Q86U86 1689 aa33.8■■■■□ 3
IREB2-209ENST00000560454 ABCA5Q8WWZ7 1642 aa33.8■■■■□ 3
IREB2-209ENST00000560454 TOP2BQ02880 1626 aa33.69■■■□□ 2.98
IREB2-209ENST00000560454 BIVM-ERCC5R4GMW8 1640 aa33.64■■■□□ 2.98
IREB2-209ENST00000560454 GRIN2AQ12879 1464 aa33.64■■■□□ 2.98
IREB2-209ENST00000560454 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
IREB2-209ENST00000560454 ADAMTS12P58397 1594 aa33.55■■■□□ 2.96
IREB2-209ENST00000560454 NUP160Q12769 1436 aa33.55■■■□□ 2.96
IREB2-209ENST00000560454 ERICH3Q5RHP9 1530 aa33.5■■■□□ 2.95
IREB2-209ENST00000560454 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
IREB2-209ENST00000560454 ERCC6L2Q5T890 1561 aa33.42■■■□□ 2.94
IREB2-209ENST00000560454 JPH4Q96JJ6 628 aa33.32■■■□□ 2.92
IREB2-209ENST00000560454 SHROOM2Q13796 1616 aa33.31■■■□□ 2.92
IREB2-209ENST00000560454 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.91
IREB2-209ENST00000560454 IGF1RP08069 1367 aa33.16■■■□□ 2.9
IREB2-209ENST00000560454 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms