RNA–Protein interactions for RNA: ENST00000560410.5

PSME2-213, Transcript of proteasome activator subunit 2, humanhuman

TSL 3 BASIC

Gene PSME2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME2-213ENST00000560410 NISCHQ9Y2I1 1504 aa29.7■■■□□ 2.34
PSME2-213ENST00000560410 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
PSME2-213ENST00000560410 ABCC9O60706 1549 aa26.24■■□□□ 1.79
PSME2-213ENST00000560410 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
PSME2-213ENST00000560410 NACADO15069 1562 aa25.03■■□□□ 1.6
PSME2-213ENST00000560410 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
PSME2-213ENST00000560410 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
PSME2-213ENST00000560410 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
PSME2-213ENST00000560410 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
PSME2-213ENST00000560410 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
PSME2-213ENST00000560410 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.51e-8■■■□□ 15
PSME2-213ENST00000560410 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
PSME2-213ENST00000560410 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
PSME2-213ENST00000560410 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
PSME2-213ENST00000560410 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
PSME2-213ENST00000560410 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
PSME2-213ENST00000560410 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
PSME2-213ENST00000560410 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
PSME2-213ENST00000560410 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
PSME2-213ENST00000560410 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
PSME2-213ENST00000560410 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
PSME2-213ENST00000560410 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
PSME2-213ENST00000560410 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
PSME2-213ENST00000560410 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
PSME2-213ENST00000560410 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
PSME2-213ENST00000560410 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
PSME2-213ENST00000560410 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
PSME2-213ENST00000560410 WIZO95785 1651 aa22.63■■□□□ 1.21
PSME2-213ENST00000560410 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
PSME2-213ENST00000560410 NESP48681 1621 aa22.63■■□□□ 1.21
PSME2-213ENST00000560410 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
PSME2-213ENST00000560410 CUX2O14529 1486 aa22.53■■□□□ 1.2
PSME2-213ENST00000560410 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
PSME2-213ENST00000560410 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
PSME2-213ENST00000560410 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.17
PSME2-213ENST00000560410 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
PSME2-213ENST00000560410 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
PSME2-213ENST00000560410 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
PSME2-213ENST00000560410 CFTRP13569 1480 aa22.21■■□□□ 1.15
PSME2-213ENST00000560410 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
PSME2-213ENST00000560410 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
PSME2-213ENST00000560410 WDR62O43379 1518 aa22.14■■□□□ 1.13
PSME2-213ENST00000560410 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
PSME2-213ENST00000560410 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
PSME2-213ENST00000560410 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
PSME2-213ENST00000560410 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
PSME2-213ENST00000560410 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
PSME2-213ENST00000560410 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
PSME2-213ENST00000560410 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
PSME2-213ENST00000560410 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
PSME2-213ENST00000560410 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
PSME2-213ENST00000560410 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
PSME2-213ENST00000560410 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
PSME2-213ENST00000560410 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
PSME2-213ENST00000560410 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
PSME2-213ENST00000560410 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
PSME2-213ENST00000560410 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
PSME2-213ENST00000560410 CUX1P39880 1505 aa21.49■■□□□ 1.03
PSME2-213ENST00000560410 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
PSME2-213ENST00000560410 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
PSME2-213ENST00000560410 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.022e-10■□□□□ 8.2
PSME2-213ENST00000560410 SOGA1O94964 1423 aa21.43■■□□□ 1.02
PSME2-213ENST00000560410 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
PSME2-213ENST00000560410 CHD1O14646 1710 aa21.35■■□□□ 1.01
PSME2-213ENST00000560410 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
PSME2-213ENST00000560410 TRIM41Q8WV44 630 aa21.28■■□□□ 1
PSME2-213ENST00000560410 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
PSME2-213ENST00000560410 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
PSME2-213ENST00000560410 RIMBP3CA6NJZ7 1639 aa21.24■□□□□ 0.99
PSME2-213ENST00000560410 RIMBP3BA6NNM3 1639 aa21.24■□□□□ 0.99
PSME2-213ENST00000560410 RIMBP3Q9UFD9 1639 aa21.24■□□□□ 0.99
PSME2-213ENST00000560410 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
PSME2-213ENST00000560410 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
PSME2-213ENST00000560410 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
PSME2-213ENST00000560410 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
PSME2-213ENST00000560410 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
PSME2-213ENST00000560410 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
PSME2-213ENST00000560410 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
PSME2-213ENST00000560410 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
PSME2-213ENST00000560410 FBLN2P98095 1184 aa21.2■□□□□ 0.98
PSME2-213ENST00000560410 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
PSME2-213ENST00000560410 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
PSME2-213ENST00000560410 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
PSME2-213ENST00000560410 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
PSME2-213ENST00000560410 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
PSME2-213ENST00000560410 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
PSME2-213ENST00000560410 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
PSME2-213ENST00000560410 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
PSME2-213ENST00000560410 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
PSME2-213ENST00000560410 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
PSME2-213ENST00000560410 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
PSME2-213ENST00000560410 NUP160Q12769 1436 aa20.9■□□□□ 0.94
PSME2-213ENST00000560410 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
PSME2-213ENST00000560410 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
PSME2-213ENST00000560410 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
PSME2-213ENST00000560410 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
PSME2-213ENST00000560410 IGF1RP08069 1367 aa20.74■□□□□ 0.91
PSME2-213ENST00000560410 CUL7Q14999 1698 aa20.74■□□□□ 0.91
PSME2-213ENST00000560410 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
PSME2-213ENST00000560410 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms