RNA–Protein interactions for RNA: ENST00000560397.5

CHP1-204, Transcript of calcineurin like EF-hand protein 1, humanhuman

TSL 3 BASIC

Gene CHP1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHP1-204ENST00000560397 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
CHP1-204ENST00000560397 ABCC9O60706 1549 aa23.78■■□□□ 1.4
CHP1-204ENST00000560397 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
CHP1-204ENST00000560397 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
CHP1-204ENST00000560397 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
CHP1-204ENST00000560397 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
CHP1-204ENST00000560397 NACADO15069 1562 aa22■■□□□ 1.11
CHP1-204ENST00000560397 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
CHP1-204ENST00000560397 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
CHP1-204ENST00000560397 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
CHP1-204ENST00000560397 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
CHP1-204ENST00000560397 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
CHP1-204ENST00000560397 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
CHP1-204ENST00000560397 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
CHP1-204ENST00000560397 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
CHP1-204ENST00000560397 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
CHP1-204ENST00000560397 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
CHP1-204ENST00000560397 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
CHP1-204ENST00000560397 DCAF1Q9Y4B6 1507 aa20.97■□□□□ 0.95
CHP1-204ENST00000560397 CUX2O14529 1486 aa20.72■□□□□ 0.91
CHP1-204ENST00000560397 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
CHP1-204ENST00000560397 NCAPD3P42695 1498 aa20.33■□□□□ 0.85
CHP1-204ENST00000560397 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
CHP1-204ENST00000560397 NESP48681 1621 aa20.24■□□□□ 0.83
CHP1-204ENST00000560397 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
CHP1-204ENST00000560397 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
CHP1-204ENST00000560397 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
CHP1-204ENST00000560397 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
CHP1-204ENST00000560397 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
CHP1-204ENST00000560397 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
CHP1-204ENST00000560397 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
CHP1-204ENST00000560397 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
CHP1-204ENST00000560397 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
CHP1-204ENST00000560397 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
CHP1-204ENST00000560397 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
CHP1-204ENST00000560397 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
CHP1-204ENST00000560397 WDR62O43379 1518 aa19.71■□□□□ 0.75
CHP1-204ENST00000560397 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
CHP1-204ENST00000560397 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
CHP1-204ENST00000560397 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
CHP1-204ENST00000560397 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
CHP1-204ENST00000560397 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
CHP1-204ENST00000560397 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
CHP1-204ENST00000560397 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
CHP1-204ENST00000560397 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
CHP1-204ENST00000560397 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
CHP1-204ENST00000560397 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
CHP1-204ENST00000560397 WIZO95785 1651 aa19.35■□□□□ 0.69
CHP1-204ENST00000560397 CFTRP13569 1480 aa19.33■□□□□ 0.68
CHP1-204ENST00000560397 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
CHP1-204ENST00000560397 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
CHP1-204ENST00000560397 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
CHP1-204ENST00000560397 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
CHP1-204ENST00000560397 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
CHP1-204ENST00000560397 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
CHP1-204ENST00000560397 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
CHP1-204ENST00000560397 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
CHP1-204ENST00000560397 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
CHP1-204ENST00000560397 CHD1O14646 1710 aa19.03■□□□□ 0.64
CHP1-204ENST00000560397 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
CHP1-204ENST00000560397 PRDM2Q13029 1718 aa19.02■□□□□ 0.63
CHP1-204ENST00000560397 FBLN2P98095 1184 aa18.99■□□□□ 0.63
CHP1-204ENST00000560397 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHP1-204ENST00000560397 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
CHP1-204ENST00000560397 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
CHP1-204ENST00000560397 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
CHP1-204ENST00000560397 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
CHP1-204ENST00000560397 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
CHP1-204ENST00000560397 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
CHP1-204ENST00000560397 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
CHP1-204ENST00000560397 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.59
CHP1-204ENST00000560397 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
CHP1-204ENST00000560397 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
CHP1-204ENST00000560397 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
CHP1-204ENST00000560397 SOGA1O94964 1423 aa18.71■□□□□ 0.59
CHP1-204ENST00000560397 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
CHP1-204ENST00000560397 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
CHP1-204ENST00000560397 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
CHP1-204ENST00000560397 SYNJ2O15056 1496 aa18.62■□□□□ 0.57
CHP1-204ENST00000560397 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
CHP1-204ENST00000560397 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
CHP1-204ENST00000560397 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
CHP1-204ENST00000560397 CUX1P39880 1505 aa18.49■□□□□ 0.55
CHP1-204ENST00000560397 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
CHP1-204ENST00000560397 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
CHP1-204ENST00000560397 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.54
CHP1-204ENST00000560397 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
CHP1-204ENST00000560397 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
CHP1-204ENST00000560397 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
CHP1-204ENST00000560397 KDM4FA0A1W2PPD8 638 aa18.34■□□□□ 0.53
CHP1-204ENST00000560397 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
CHP1-204ENST00000560397 NUP160Q12769 1436 aa18.33■□□□□ 0.53
CHP1-204ENST00000560397 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
CHP1-204ENST00000560397 FAM69CQ0P6D2 419 aa18.29■□□□□ 0.52
CHP1-204ENST00000560397 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
CHP1-204ENST00000560397 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
CHP1-204ENST00000560397 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
CHP1-204ENST00000560397 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
CHP1-204ENST00000560397 KDM6BO15054 1643 aa18.19■□□□□ 0.5
CHP1-204ENST00000560397 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms