RNA–Protein interactions for RNA: ENST00000560374.5

HOMER2-207, Transcript of homer scaffold protein 2, humanhuman

TSL 3

Gene HOMER2, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-207ENST00000560374 NISCHQ9Y2I1 1504 aa35.98■■■■□ 3.35
HOMER2-207ENST00000560374 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
HOMER2-207ENST00000560374 ABCC9O60706 1549 aa31.38■■■□□ 2.61
HOMER2-207ENST00000560374 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
HOMER2-207ENST00000560374 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
HOMER2-207ENST00000560374 NACADO15069 1562 aa30.07■■■□□ 2.4
HOMER2-207ENST00000560374 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
HOMER2-207ENST00000560374 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
HOMER2-207ENST00000560374 DCAF1Q9Y4B6 1507 aa29.73■■■□□ 2.35
HOMER2-207ENST00000560374 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.3
HOMER2-207ENST00000560374 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
HOMER2-207ENST00000560374 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
HOMER2-207ENST00000560374 SCRIBQ14160 1630 aa29.2■■■□□ 2.26
HOMER2-207ENST00000560374 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
HOMER2-207ENST00000560374 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
HOMER2-207ENST00000560374 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
HOMER2-207ENST00000560374 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
HOMER2-207ENST00000560374 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
HOMER2-207ENST00000560374 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
HOMER2-207ENST00000560374 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
HOMER2-207ENST00000560374 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
HOMER2-207ENST00000560374 NCAPD3P42695 1498 aa27.77■■■□□ 2.04
HOMER2-207ENST00000560374 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
HOMER2-207ENST00000560374 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
HOMER2-207ENST00000560374 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
HOMER2-207ENST00000560374 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
HOMER2-207ENST00000560374 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
HOMER2-207ENST00000560374 WIZO95785 1651 aa27.42■■□□□ 1.98
HOMER2-207ENST00000560374 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
HOMER2-207ENST00000560374 NESP48681 1621 aa27.13■■□□□ 1.93
HOMER2-207ENST00000560374 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
HOMER2-207ENST00000560374 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
HOMER2-207ENST00000560374 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
HOMER2-207ENST00000560374 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
HOMER2-207ENST00000560374 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
HOMER2-207ENST00000560374 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
HOMER2-207ENST00000560374 CFTRP13569 1480 aa26.8■■□□□ 1.88
HOMER2-207ENST00000560374 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
HOMER2-207ENST00000560374 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
HOMER2-207ENST00000560374 CUX2O14529 1486 aa26.73■■□□□ 1.87
HOMER2-207ENST00000560374 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
HOMER2-207ENST00000560374 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
HOMER2-207ENST00000560374 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
HOMER2-207ENST00000560374 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
HOMER2-207ENST00000560374 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
HOMER2-207ENST00000560374 WDR62O43379 1518 aa26.48■■□□□ 1.83
HOMER2-207ENST00000560374 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.82
HOMER2-207ENST00000560374 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
HOMER2-207ENST00000560374 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
HOMER2-207ENST00000560374 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
HOMER2-207ENST00000560374 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
HOMER2-207ENST00000560374 CUX1P39880 1505 aa26.01■■□□□ 1.75
HOMER2-207ENST00000560374 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
HOMER2-207ENST00000560374 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
HOMER2-207ENST00000560374 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
HOMER2-207ENST00000560374 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
HOMER2-207ENST00000560374 SOGA1O94964 1423 aa25.93■■□□□ 1.74
HOMER2-207ENST00000560374 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
HOMER2-207ENST00000560374 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
HOMER2-207ENST00000560374 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
HOMER2-207ENST00000560374 AQRO60306 1485 aaKnown RBP eCLIP25.84■■□□□ 1.73
HOMER2-207ENST00000560374 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
HOMER2-207ENST00000560374 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
HOMER2-207ENST00000560374 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
HOMER2-207ENST00000560374 TOP2BQ02880 1626 aa25.76■■□□□ 1.71
HOMER2-207ENST00000560374 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
HOMER2-207ENST00000560374 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
HOMER2-207ENST00000560374 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
HOMER2-207ENST00000560374 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
HOMER2-207ENST00000560374 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
HOMER2-207ENST00000560374 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
HOMER2-207ENST00000560374 FBLN2P98095 1184 aa25.58■■□□□ 1.69
HOMER2-207ENST00000560374 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
HOMER2-207ENST00000560374 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
HOMER2-207ENST00000560374 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
HOMER2-207ENST00000560374 CHD1O14646 1710 aa25.49■■□□□ 1.67
HOMER2-207ENST00000560374 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
HOMER2-207ENST00000560374 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
HOMER2-207ENST00000560374 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
HOMER2-207ENST00000560374 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
HOMER2-207ENST00000560374 KIF27Q86VH2 1401 aa25.32■■□□□ 1.64
HOMER2-207ENST00000560374 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
HOMER2-207ENST00000560374 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
HOMER2-207ENST00000560374 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
HOMER2-207ENST00000560374 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
HOMER2-207ENST00000560374 IGF1RP08069 1367 aa25.24■■□□□ 1.63
HOMER2-207ENST00000560374 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
HOMER2-207ENST00000560374 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
HOMER2-207ENST00000560374 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
HOMER2-207ENST00000560374 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
HOMER2-207ENST00000560374 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
HOMER2-207ENST00000560374 NUP160Q12769 1436 aa25.15■■□□□ 1.62
HOMER2-207ENST00000560374 CEP170Q5SW79 1584 aa25.13■■□□□ 1.61
HOMER2-207ENST00000560374 CUL7Q14999 1698 aa25.1■■□□□ 1.61
HOMER2-207ENST00000560374 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
HOMER2-207ENST00000560374 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
HOMER2-207ENST00000560374 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
HOMER2-207ENST00000560374 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
HOMER2-207ENST00000560374 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
HOMER2-207ENST00000560374 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms