RNA–Protein interactions for RNA: ENST00000560342.5

RNF31-221, Transcript of ring finger protein 31, humanhuman

TSL 2

Gene RNF31, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-221ENST00000560342 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
RNF31-221ENST00000560342 ABCC9O60706 1549 aa36.26■■■■□ 3.4
RNF31-221ENST00000560342 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
RNF31-221ENST00000560342 RB1CC1Q8TDY2 1594 aa34.42■■■■□ 3.1
RNF31-221ENST00000560342 NACADO15069 1562 aa34.13■■■■□ 3.05
RNF31-221ENST00000560342 DNAJC5BQ9UF47 199 aa34.11■■■■□ 3.05
RNF31-221ENST00000560342 DCAF8L2P0C7V8 631 aa34.09■■■■□ 3.05
RNF31-221ENST00000560342 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
RNF31-221ENST00000560342 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
RNF31-221ENST00000560342 UNC13AQ9UPW8 1703 aa33.52■■■□□ 2.96
RNF31-221ENST00000560342 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
RNF31-221ENST00000560342 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
RNF31-221ENST00000560342 DCAF1Q9Y4B6 1507 aa33.09■■■□□ 2.89
RNF31-221ENST00000560342 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
RNF31-221ENST00000560342 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
RNF31-221ENST00000560342 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
RNF31-221ENST00000560342 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
RNF31-221ENST00000560342 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
RNF31-221ENST00000560342 NCAPD3P42695 1498 aa31.51■■■□□ 2.63
RNF31-221ENST00000560342 DNAJC5Q9H3Z4 198 aa31.48■■■□□ 2.63
RNF31-221ENST00000560342 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
RNF31-221ENST00000560342 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
RNF31-221ENST00000560342 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
RNF31-221ENST00000560342 SMARCA4P51532 1647 aa31.31■■■□□ 2.6
RNF31-221ENST00000560342 CUX2O14529 1486 aa31.3■■■□□ 2.6
RNF31-221ENST00000560342 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
RNF31-221ENST00000560342 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
RNF31-221ENST00000560342 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
RNF31-221ENST00000560342 NESP48681 1621 aa31.07■■■□□ 2.56
RNF31-221ENST00000560342 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
RNF31-221ENST00000560342 MROH2BQ7Z745 1585 aa30.89■■■□□ 2.54
RNF31-221ENST00000560342 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
RNF31-221ENST00000560342 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
RNF31-221ENST00000560342 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
RNF31-221ENST00000560342 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
RNF31-221ENST00000560342 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
RNF31-221ENST00000560342 WIZO95785 1651 aa30.51■■■□□ 2.47
RNF31-221ENST00000560342 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
RNF31-221ENST00000560342 WDR62O43379 1518 aa30.32■■■□□ 2.44
RNF31-221ENST00000560342 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
RNF31-221ENST00000560342 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
RNF31-221ENST00000560342 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
RNF31-221ENST00000560342 CFTRP13569 1480 aa30.17■■■□□ 2.42
RNF31-221ENST00000560342 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
RNF31-221ENST00000560342 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
RNF31-221ENST00000560342 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
RNF31-221ENST00000560342 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
RNF31-221ENST00000560342 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
RNF31-221ENST00000560342 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
RNF31-221ENST00000560342 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
RNF31-221ENST00000560342 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
RNF31-221ENST00000560342 ZNF608Q9ULD9 1512 aaPredicted RBP29.62■■■□□ 2.33
RNF31-221ENST00000560342 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
RNF31-221ENST00000560342 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
RNF31-221ENST00000560342 RIMBP3CA6NJZ7 1639 aa29.45■■■□□ 2.3
RNF31-221ENST00000560342 RIMBP3BA6NNM3 1639 aa29.45■■■□□ 2.3
RNF31-221ENST00000560342 RIMBP3Q9UFD9 1639 aa29.45■■■□□ 2.3
RNF31-221ENST00000560342 EIF4G3O43432 1585 aaKnown RBP29.43■■■□□ 2.3
RNF31-221ENST00000560342 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
RNF31-221ENST00000560342 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.299e-11■■■■■ 32.3
RNF31-221ENST00000560342 TARBP1Q13395 1621 aaKnown RBP29.32■■■□□ 2.28
RNF31-221ENST00000560342 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
RNF31-221ENST00000560342 FBLN2P98095 1184 aa29.3■■■□□ 2.28
RNF31-221ENST00000560342 CYB5RLQ6IPT4 315 aa29.23■■■□□ 2.27
RNF31-221ENST00000560342 CHD1O14646 1710 aa29.23■■■□□ 2.27
RNF31-221ENST00000560342 RAD54L2Q9Y4B4 1467 aa29.22■■■□□ 2.27
RNF31-221ENST00000560342 SOGA1O94964 1423 aa29.21■■■□□ 2.27
RNF31-221ENST00000560342 TDRD9Q8NDG6 1382 aaKnown RBP29.18■■■□□ 2.26
RNF31-221ENST00000560342 FGD5Q6ZNL6 1462 aa29.11■■■□□ 2.25
RNF31-221ENST00000560342 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
RNF31-221ENST00000560342 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
RNF31-221ENST00000560342 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
RNF31-221ENST00000560342 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
RNF31-221ENST00000560342 CUX1P39880 1505 aa29.04■■■□□ 2.24
RNF31-221ENST00000560342 TRHP20396 242 aaPredicted RBP29.02■■■□□ 2.24
RNF31-221ENST00000560342 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
RNF31-221ENST00000560342 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
RNF31-221ENST00000560342 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
RNF31-221ENST00000560342 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
RNF31-221ENST00000560342 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
RNF31-221ENST00000560342 SYNJ2O15056 1496 aa28.88■■■□□ 2.21
RNF31-221ENST00000560342 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
RNF31-221ENST00000560342 PBRM1Q86U86 1689 aa28.78■■■□□ 2.2
RNF31-221ENST00000560342 ABCA10Q8WWZ4 1543 aa28.76■■■□□ 2.19
RNF31-221ENST00000560342 ABCA5Q8WWZ7 1642 aa28.69■■■□□ 2.18
RNF31-221ENST00000560342 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
RNF31-221ENST00000560342 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
RNF31-221ENST00000560342 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
RNF31-221ENST00000560342 ADAMTS12P58397 1594 aa28.51■■■□□ 2.15
RNF31-221ENST00000560342 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
RNF31-221ENST00000560342 FHAD1B1AJZ9 1412 aa28.48■■■□□ 2.15
RNF31-221ENST00000560342 NUP160Q12769 1436 aa28.47■■■□□ 2.15
RNF31-221ENST00000560342 CEP170Q5SW79 1584 aa28.45■■■□□ 2.15
RNF31-221ENST00000560342 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
RNF31-221ENST00000560342 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
RNF31-221ENST00000560342 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
RNF31-221ENST00000560342 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
RNF31-221ENST00000560342 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
RNF31-221ENST00000560342 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
RNF31-221ENST00000560342 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms