RNA–Protein interactions for RNA: ENST00000560319.1

IGDCC4-205, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 4

Gene IGDCC4, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-205ENST00000560319 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
IGDCC4-205ENST00000560319 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
IGDCC4-205ENST00000560319 ABCC9O60706 1549 aa29.81■■■□□ 2.36
IGDCC4-205ENST00000560319 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
IGDCC4-205ENST00000560319 NACADO15069 1562 aa28.29■■■□□ 2.12
IGDCC4-205ENST00000560319 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
IGDCC4-205ENST00000560319 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
IGDCC4-205ENST00000560319 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
IGDCC4-205ENST00000560319 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
IGDCC4-205ENST00000560319 PABPN1Q86U42 306 aaKnown RBP eCLIP27.82■■■□□ 2.04
IGDCC4-205ENST00000560319 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
IGDCC4-205ENST00000560319 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
IGDCC4-205ENST00000560319 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
IGDCC4-205ENST00000560319 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
IGDCC4-205ENST00000560319 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
IGDCC4-205ENST00000560319 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
IGDCC4-205ENST00000560319 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
IGDCC4-205ENST00000560319 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
IGDCC4-205ENST00000560319 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
IGDCC4-205ENST00000560319 NCAPD3P42695 1498 aa26.12■■□□□ 1.77
IGDCC4-205ENST00000560319 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
IGDCC4-205ENST00000560319 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
IGDCC4-205ENST00000560319 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
IGDCC4-205ENST00000560319 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
IGDCC4-205ENST00000560319 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
IGDCC4-205ENST00000560319 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
IGDCC4-205ENST00000560319 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
IGDCC4-205ENST00000560319 NESP48681 1621 aa25.73■■□□□ 1.71
IGDCC4-205ENST00000560319 WIZO95785 1651 aa25.68■■□□□ 1.7
IGDCC4-205ENST00000560319 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
IGDCC4-205ENST00000560319 CUX2O14529 1486 aa25.49■■□□□ 1.67
IGDCC4-205ENST00000560319 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
IGDCC4-205ENST00000560319 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
IGDCC4-205ENST00000560319 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
IGDCC4-205ENST00000560319 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
IGDCC4-205ENST00000560319 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
IGDCC4-205ENST00000560319 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
IGDCC4-205ENST00000560319 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
IGDCC4-205ENST00000560319 DNAJC5Q9H3Z4 198 aa25.21■■□□□ 1.63
IGDCC4-205ENST00000560319 CFTRP13569 1480 aa25.13■■□□□ 1.61
IGDCC4-205ENST00000560319 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
IGDCC4-205ENST00000560319 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
IGDCC4-205ENST00000560319 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
IGDCC4-205ENST00000560319 WDR62O43379 1518 aa25.05■■□□□ 1.6
IGDCC4-205ENST00000560319 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
IGDCC4-205ENST00000560319 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
IGDCC4-205ENST00000560319 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
IGDCC4-205ENST00000560319 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
IGDCC4-205ENST00000560319 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
IGDCC4-205ENST00000560319 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
IGDCC4-205ENST00000560319 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
IGDCC4-205ENST00000560319 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
IGDCC4-205ENST00000560319 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
IGDCC4-205ENST00000560319 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
IGDCC4-205ENST00000560319 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
IGDCC4-205ENST00000560319 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
IGDCC4-205ENST00000560319 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
IGDCC4-205ENST00000560319 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
IGDCC4-205ENST00000560319 CUX1P39880 1505 aa24.36■■□□□ 1.49
IGDCC4-205ENST00000560319 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.49
IGDCC4-205ENST00000560319 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
IGDCC4-205ENST00000560319 SOGA1O94964 1423 aa24.29■■□□□ 1.48
IGDCC4-205ENST00000560319 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
IGDCC4-205ENST00000560319 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
IGDCC4-205ENST00000560319 CHD1O14646 1710 aa24.21■■□□□ 1.47
IGDCC4-205ENST00000560319 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
IGDCC4-205ENST00000560319 RIMBP3CA6NJZ7 1639 aa24.11■■□□□ 1.45
IGDCC4-205ENST00000560319 RIMBP3BA6NNM3 1639 aa24.11■■□□□ 1.45
IGDCC4-205ENST00000560319 RIMBP3Q9UFD9 1639 aa24.11■■□□□ 1.45
IGDCC4-205ENST00000560319 FBLN2P98095 1184 aa24.1■■□□□ 1.45
IGDCC4-205ENST00000560319 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
IGDCC4-205ENST00000560319 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
IGDCC4-205ENST00000560319 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
IGDCC4-205ENST00000560319 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
IGDCC4-205ENST00000560319 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
IGDCC4-205ENST00000560319 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
IGDCC4-205ENST00000560319 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
IGDCC4-205ENST00000560319 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
IGDCC4-205ENST00000560319 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
IGDCC4-205ENST00000560319 TOP2BQ02880 1626 aa24■■□□□ 1.43
IGDCC4-205ENST00000560319 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
IGDCC4-205ENST00000560319 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
IGDCC4-205ENST00000560319 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
IGDCC4-205ENST00000560319 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
IGDCC4-205ENST00000560319 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
IGDCC4-205ENST00000560319 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
IGDCC4-205ENST00000560319 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
IGDCC4-205ENST00000560319 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
IGDCC4-205ENST00000560319 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
IGDCC4-205ENST00000560319 ERICH3Q5RHP9 1530 aa23.71■■□□□ 1.39
IGDCC4-205ENST00000560319 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
IGDCC4-205ENST00000560319 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
IGDCC4-205ENST00000560319 NUP160Q12769 1436 aa23.66■■□□□ 1.38
IGDCC4-205ENST00000560319 ERCC6L2Q5T890 1561 aa23.62■■□□□ 1.37
IGDCC4-205ENST00000560319 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
IGDCC4-205ENST00000560319 IGF1RP08069 1367 aa23.52■■□□□ 1.36
IGDCC4-205ENST00000560319 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
IGDCC4-205ENST00000560319 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
IGDCC4-205ENST00000560319 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
IGDCC4-205ENST00000560319 CUL7Q14999 1698 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms