RNA–Protein interactions for RNA: ENST00000560245.5

MEIS3-207, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MEIS3, Length 1,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-207ENST00000560245 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
MEIS3-207ENST00000560245 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
MEIS3-207ENST00000560245 ABCC9O60706 1549 aa31.29■■■□□ 2.6
MEIS3-207ENST00000560245 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
MEIS3-207ENST00000560245 NACADO15069 1562 aa30.32■■■□□ 2.45
MEIS3-207ENST00000560245 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
MEIS3-207ENST00000560245 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
MEIS3-207ENST00000560245 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
MEIS3-207ENST00000560245 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
MEIS3-207ENST00000560245 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
MEIS3-207ENST00000560245 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
MEIS3-207ENST00000560245 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
MEIS3-207ENST00000560245 PABPN1Q86U42 306 aaKnown RBP eCLIP29.19■■■□□ 2.26
MEIS3-207ENST00000560245 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
MEIS3-207ENST00000560245 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
MEIS3-207ENST00000560245 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
MEIS3-207ENST00000560245 CC2D2AQ9P2K1 1620 aa28.39■■■□□ 2.13
MEIS3-207ENST00000560245 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
MEIS3-207ENST00000560245 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
MEIS3-207ENST00000560245 BAZ1AQ9NRL2 1556 aaPredicted RBP28.23■■■□□ 2.11
MEIS3-207ENST00000560245 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
MEIS3-207ENST00000560245 SMARCA2P51531 1590 aa28■■■□□ 2.07
MEIS3-207ENST00000560245 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
MEIS3-207ENST00000560245 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
MEIS3-207ENST00000560245 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
MEIS3-207ENST00000560245 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
MEIS3-207ENST00000560245 WIZO95785 1651 aa27.77■■■□□ 2.04
MEIS3-207ENST00000560245 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
MEIS3-207ENST00000560245 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
MEIS3-207ENST00000560245 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
MEIS3-207ENST00000560245 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
MEIS3-207ENST00000560245 NESP48681 1621 aa27.14■■□□□ 1.94
MEIS3-207ENST00000560245 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
MEIS3-207ENST00000560245 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
MEIS3-207ENST00000560245 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
MEIS3-207ENST00000560245 CFTRP13569 1480 aa27.01■■□□□ 1.91
MEIS3-207ENST00000560245 PRDM2Q13029 1718 aa27■■□□□ 1.91
MEIS3-207ENST00000560245 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
MEIS3-207ENST00000560245 PDS5BQ9NTI5 1447 aa26.96■■□□□ 1.91
MEIS3-207ENST00000560245 KIF21AQ7Z4S6 1674 aa26.94■■□□□ 1.9
MEIS3-207ENST00000560245 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
MEIS3-207ENST00000560245 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
MEIS3-207ENST00000560245 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
MEIS3-207ENST00000560245 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
MEIS3-207ENST00000560245 CUX2O14529 1486 aa26.67■■□□□ 1.86
MEIS3-207ENST00000560245 WDR62O43379 1518 aa26.62■■□□□ 1.85
MEIS3-207ENST00000560245 URB2Q14146 1524 aaKnown RBP26.52■■□□□ 1.84
MEIS3-207ENST00000560245 ABCC8Q09428 1581 aa26.47■■□□□ 1.83
MEIS3-207ENST00000560245 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
MEIS3-207ENST00000560245 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
MEIS3-207ENST00000560245 CUX1P39880 1505 aa26.29■■□□□ 1.8
MEIS3-207ENST00000560245 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
MEIS3-207ENST00000560245 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
MEIS3-207ENST00000560245 IFT140Q96RY7 1462 aa26.19■■□□□ 1.78
MEIS3-207ENST00000560245 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
MEIS3-207ENST00000560245 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
MEIS3-207ENST00000560245 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
MEIS3-207ENST00000560245 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
MEIS3-207ENST00000560245 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
MEIS3-207ENST00000560245 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
MEIS3-207ENST00000560245 SOGA1O94964 1423 aa26.06■■□□□ 1.76
MEIS3-207ENST00000560245 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
MEIS3-207ENST00000560245 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
MEIS3-207ENST00000560245 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
MEIS3-207ENST00000560245 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
MEIS3-207ENST00000560245 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
MEIS3-207ENST00000560245 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
MEIS3-207ENST00000560245 ABCA5Q8WWZ7 1642 aa25.87■■□□□ 1.73
MEIS3-207ENST00000560245 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
MEIS3-207ENST00000560245 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
MEIS3-207ENST00000560245 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
MEIS3-207ENST00000560245 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
MEIS3-207ENST00000560245 MAGI1Q96QZ7 1491 aaPredicted RBP25.71■■□□□ 1.71
MEIS3-207ENST00000560245 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
MEIS3-207ENST00000560245 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
MEIS3-207ENST00000560245 CHD1O14646 1710 aa25.66■■□□□ 1.7
MEIS3-207ENST00000560245 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
MEIS3-207ENST00000560245 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
MEIS3-207ENST00000560245 ADAMTS12P58397 1594 aa25.59■■□□□ 1.69
MEIS3-207ENST00000560245 SYNJ2O15056 1496 aa25.59■■□□□ 1.69
MEIS3-207ENST00000560245 CUL7Q14999 1698 aa25.52■■□□□ 1.68
MEIS3-207ENST00000560245 OSCARQ8IYS5 282 aa25.51■■□□□ 1.67
MEIS3-207ENST00000560245 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
MEIS3-207ENST00000560245 FBLN2P98095 1184 aa25.47■■□□□ 1.67
MEIS3-207ENST00000560245 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
MEIS3-207ENST00000560245 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
MEIS3-207ENST00000560245 IGF1RP08069 1367 aa25.45■■□□□ 1.67
MEIS3-207ENST00000560245 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
MEIS3-207ENST00000560245 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
MEIS3-207ENST00000560245 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
MEIS3-207ENST00000560245 EEA1Q15075 1411 aa25.33■■□□□ 1.65
MEIS3-207ENST00000560245 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
MEIS3-207ENST00000560245 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
MEIS3-207ENST00000560245 NUP160Q12769 1436 aa25.31■■□□□ 1.64
MEIS3-207ENST00000560245 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
MEIS3-207ENST00000560245 PRXQ9BXM0 1461 aa25.2■■□□□ 1.62
MEIS3-207ENST00000560245 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
MEIS3-207ENST00000560245 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
MEIS3-207ENST00000560245 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
MEIS3-207ENST00000560245 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms