RNA–Protein interactions for RNA: ENST00000560230.1

IL16-211, Transcript of interleukin 16, humanhuman

TSL 4

Gene IL16, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IL16-211ENST00000560230 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
IL16-211ENST00000560230 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
IL16-211ENST00000560230 ABCC9O60706 1549 aa25.23■■□□□ 1.63
IL16-211ENST00000560230 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
IL16-211ENST00000560230 NACADO15069 1562 aa24.14■■□□□ 1.45
IL16-211ENST00000560230 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
IL16-211ENST00000560230 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
IL16-211ENST00000560230 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
IL16-211ENST00000560230 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
IL16-211ENST00000560230 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
IL16-211ENST00000560230 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
IL16-211ENST00000560230 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
IL16-211ENST00000560230 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
IL16-211ENST00000560230 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
IL16-211ENST00000560230 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
IL16-211ENST00000560230 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
IL16-211ENST00000560230 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
IL16-211ENST00000560230 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
IL16-211ENST00000560230 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
IL16-211ENST00000560230 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
IL16-211ENST00000560230 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
IL16-211ENST00000560230 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
IL16-211ENST00000560230 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
IL16-211ENST00000560230 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
IL16-211ENST00000560230 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
IL16-211ENST00000560230 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
IL16-211ENST00000560230 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
IL16-211ENST00000560230 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
IL16-211ENST00000560230 CUX2O14529 1486 aa21.86■■□□□ 1.09
IL16-211ENST00000560230 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
IL16-211ENST00000560230 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
IL16-211ENST00000560230 NESP48681 1621 aa21.72■■□□□ 1.07
IL16-211ENST00000560230 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
IL16-211ENST00000560230 WIZO95785 1651 aa21.63■■□□□ 1.05
IL16-211ENST00000560230 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
IL16-211ENST00000560230 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
IL16-211ENST00000560230 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
IL16-211ENST00000560230 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
IL16-211ENST00000560230 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
IL16-211ENST00000560230 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
IL16-211ENST00000560230 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
IL16-211ENST00000560230 WDR62O43379 1518 aa21.37■■□□□ 1.01
IL16-211ENST00000560230 CFTRP13569 1480 aa21.34■■□□□ 1.01
IL16-211ENST00000560230 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
IL16-211ENST00000560230 PRDM2Q13029 1718 aa21.28■■□□□ 1
IL16-211ENST00000560230 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
IL16-211ENST00000560230 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
IL16-211ENST00000560230 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
IL16-211ENST00000560230 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
IL16-211ENST00000560230 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
IL16-211ENST00000560230 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
IL16-211ENST00000560230 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
IL16-211ENST00000560230 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
IL16-211ENST00000560230 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
IL16-211ENST00000560230 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
IL16-211ENST00000560230 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
IL16-211ENST00000560230 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
IL16-211ENST00000560230 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
IL16-211ENST00000560230 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
IL16-211ENST00000560230 CUX1P39880 1505 aa20.57■□□□□ 0.88
IL16-211ENST00000560230 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
IL16-211ENST00000560230 CHD1O14646 1710 aa20.56■□□□□ 0.88
IL16-211ENST00000560230 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
IL16-211ENST00000560230 SOGA1O94964 1423 aa20.53■□□□□ 0.88
IL16-211ENST00000560230 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
IL16-211ENST00000560230 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
IL16-211ENST00000560230 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
IL16-211ENST00000560230 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
IL16-211ENST00000560230 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
IL16-211ENST00000560230 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
IL16-211ENST00000560230 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
IL16-211ENST00000560230 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
IL16-211ENST00000560230 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
IL16-211ENST00000560230 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
IL16-211ENST00000560230 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
IL16-211ENST00000560230 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
IL16-211ENST00000560230 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
IL16-211ENST00000560230 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
IL16-211ENST00000560230 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
IL16-211ENST00000560230 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
IL16-211ENST00000560230 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
IL16-211ENST00000560230 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
IL16-211ENST00000560230 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
IL16-211ENST00000560230 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
IL16-211ENST00000560230 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
IL16-211ENST00000560230 FBLN2P98095 1184 aa20.27■□□□□ 0.84
IL16-211ENST00000560230 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
IL16-211ENST00000560230 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
IL16-211ENST00000560230 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
IL16-211ENST00000560230 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
IL16-211ENST00000560230 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
IL16-211ENST00000560230 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
IL16-211ENST00000560230 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
IL16-211ENST00000560230 NUP160Q12769 1436 aa20.1■□□□□ 0.81
IL16-211ENST00000560230 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
IL16-211ENST00000560230 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
IL16-211ENST00000560230 ILDR1Q86SU0 546 aaPredicted RBP19.96■□□□□ 0.79
IL16-211ENST00000560230 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
IL16-211ENST00000560230 CUL7Q14999 1698 aa19.94■□□□□ 0.78
IL16-211ENST00000560230 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms