RNA–Protein interactions for RNA: ENST00000560212.1

TM2D3-210, Transcript of TM2 domain containing 3, humanhuman

TSL 3

Gene TM2D3, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-210ENST00000560212 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
TM2D3-210ENST00000560212 ABCC9O60706 1549 aa18.97■□□□□ 0.63
TM2D3-210ENST00000560212 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
TM2D3-210ENST00000560212 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
TM2D3-210ENST00000560212 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
TM2D3-210ENST00000560212 NACADO15069 1562 aa17.97■□□□□ 0.47
TM2D3-210ENST00000560212 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
TM2D3-210ENST00000560212 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
TM2D3-210ENST00000560212 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
TM2D3-210ENST00000560212 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
TM2D3-210ENST00000560212 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
TM2D3-210ENST00000560212 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
TM2D3-210ENST00000560212 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
TM2D3-210ENST00000560212 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
TM2D3-210ENST00000560212 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
TM2D3-210ENST00000560212 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
TM2D3-210ENST00000560212 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
TM2D3-210ENST00000560212 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
TM2D3-210ENST00000560212 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
TM2D3-210ENST00000560212 CUX2O14529 1486 aa16.74■□□□□ 0.27
TM2D3-210ENST00000560212 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
TM2D3-210ENST00000560212 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
TM2D3-210ENST00000560212 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
TM2D3-210ENST00000560212 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
TM2D3-210ENST00000560212 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
TM2D3-210ENST00000560212 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
TM2D3-210ENST00000560212 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
TM2D3-210ENST00000560212 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
TM2D3-210ENST00000560212 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
TM2D3-210ENST00000560212 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
TM2D3-210ENST00000560212 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
TM2D3-210ENST00000560212 NESP48681 1621 aa16.19■□□□□ 0.18
TM2D3-210ENST00000560212 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
TM2D3-210ENST00000560212 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
TM2D3-210ENST00000560212 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TM2D3-210ENST00000560212 WDR62O43379 1518 aa15.97■□□□□ 0.15
TM2D3-210ENST00000560212 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
TM2D3-210ENST00000560212 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
TM2D3-210ENST00000560212 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
TM2D3-210ENST00000560212 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
TM2D3-210ENST00000560212 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
TM2D3-210ENST00000560212 CFTRP13569 1480 aa15.81■□□□□ 0.12
TM2D3-210ENST00000560212 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
TM2D3-210ENST00000560212 WIZO95785 1651 aa15.64■□□□□ 0.09
TM2D3-210ENST00000560212 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
TM2D3-210ENST00000560212 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
TM2D3-210ENST00000560212 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
TM2D3-210ENST00000560212 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.09
TM2D3-210ENST00000560212 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
TM2D3-210ENST00000560212 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
TM2D3-210ENST00000560212 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
TM2D3-210ENST00000560212 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
TM2D3-210ENST00000560212 ARHGEF11O15085 1522 aa15.52■□□□□ 0.07
TM2D3-210ENST00000560212 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
TM2D3-210ENST00000560212 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
TM2D3-210ENST00000560212 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
TM2D3-210ENST00000560212 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
TM2D3-210ENST00000560212 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
TM2D3-210ENST00000560212 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
TM2D3-210ENST00000560212 EIF4G3O43432 1585 aaKnown RBP15.34■□□□□ 0.05
TM2D3-210ENST00000560212 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
TM2D3-210ENST00000560212 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
TM2D3-210ENST00000560212 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
TM2D3-210ENST00000560212 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
TM2D3-210ENST00000560212 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.04
TM2D3-210ENST00000560212 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
TM2D3-210ENST00000560212 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
TM2D3-210ENST00000560212 SOGA1O94964 1423 aa15.22■□□□□ 0.03
TM2D3-210ENST00000560212 CHD1O14646 1710 aa15.21■□□□□ 0.03
TM2D3-210ENST00000560212 FBLN2P98095 1184 aa15.21■□□□□ 0.03
TM2D3-210ENST00000560212 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
TM2D3-210ENST00000560212 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
TM2D3-210ENST00000560212 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
TM2D3-210ENST00000560212 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
TM2D3-210ENST00000560212 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
TM2D3-210ENST00000560212 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
TM2D3-210ENST00000560212 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
TM2D3-210ENST00000560212 SNAPC4Q5SXM2 1469 aa15.13■□□□□ 0.01
TM2D3-210ENST00000560212 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
TM2D3-210ENST00000560212 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
TM2D3-210ENST00000560212 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
TM2D3-210ENST00000560212 CUX1P39880 1505 aa15.01□□□□□ -0.01
TM2D3-210ENST00000560212 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
TM2D3-210ENST00000560212 NUP160Q12769 1436 aa14.95□□□□□ -0.02
TM2D3-210ENST00000560212 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
TM2D3-210ENST00000560212 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
TM2D3-210ENST00000560212 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
TM2D3-210ENST00000560212 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
TM2D3-210ENST00000560212 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
TM2D3-210ENST00000560212 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
TM2D3-210ENST00000560212 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
TM2D3-210ENST00000560212 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
TM2D3-210ENST00000560212 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
TM2D3-210ENST00000560212 JPH4Q96JJ6 628 aa14.79□□□□□ -0.04
TM2D3-210ENST00000560212 ABCC10Q5T3U5 1492 aa14.77□□□□□ -0.04
TM2D3-210ENST00000560212 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.05
TM2D3-210ENST00000560212 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
TM2D3-210ENST00000560212 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
TM2D3-210ENST00000560212 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
TM2D3-210ENST00000560212 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms