RNA–Protein interactions for RNA: ENST00000560205.5

NIPA2-208, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 4

Gene NIPA2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-208ENST00000560205 NISCHQ9Y2I1 1504 aa52.89■■■■■ 6.06
NIPA2-208ENST00000560205 CCDC180Q9P1Z9 1646 aa47.2■■■■■ 5.15
NIPA2-208ENST00000560205 ABCC9O60706 1549 aa46.45■■■■■ 5.03
NIPA2-208ENST00000560205 RB1CC1Q8TDY2 1594 aa44.6■■■■■ 4.73
NIPA2-208ENST00000560205 NACADO15069 1562 aa44.48■■■■■ 4.71
NIPA2-208ENST00000560205 DCAF8L2P0C7V8 631 aa44.33■■■■■ 4.69
NIPA2-208ENST00000560205 MYO15BQ96JP2 1530 aa44.14■■■■■ 4.66
NIPA2-208ENST00000560205 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
NIPA2-208ENST00000560205 DCAF1Q9Y4B6 1507 aa43.79■■■■■ 4.6
NIPA2-208ENST00000560205 UNC13AQ9UPW8 1703 aa43.56■■■■■ 4.56
NIPA2-208ENST00000560205 PABPN1Q86U42 306 aaKnown RBP eCLIP43.35■■■■■ 4.53
NIPA2-208ENST00000560205 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
NIPA2-208ENST00000560205 SCRIBQ14160 1630 aa42.96■■■■■ 4.47
NIPA2-208ENST00000560205 DNAJC5BQ9UF47 199 aa42.95■■■■■ 4.47
NIPA2-208ENST00000560205 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.45
NIPA2-208ENST00000560205 EIF4G1Q04637 1599 aaKnown RBP42.12■■■■■ 4.33
NIPA2-208ENST00000560205 CC2D2AQ9P2K1 1620 aa42.03■■■■■ 4.32
NIPA2-208ENST00000560205 CECR2Q9BXF3 1484 aa41.81■■■■■ 4.28
NIPA2-208ENST00000560205 SMARCA4P51532 1647 aa41.1■■■■■ 4.17
NIPA2-208ENST00000560205 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
NIPA2-208ENST00000560205 BAZ1AQ9NRL2 1556 aaPredicted RBP41.04■■■■■ 4.16
NIPA2-208ENST00000560205 ATAD2BQ9ULI0 1458 aa40.98■■■■■ 4.15
NIPA2-208ENST00000560205 SMARCA2P51531 1590 aa40.95■■■■■ 4.15
NIPA2-208ENST00000560205 HMGXB3Q12766 1538 aa40.79■■■■■ 4.12
NIPA2-208ENST00000560205 PEG3Q9GZU2 1588 aa40.74■■■■■ 4.11
NIPA2-208ENST00000560205 MROH2BQ7Z745 1585 aa40.72■■■■■ 4.11
NIPA2-208ENST00000560205 BAZ1BQ9UIG0 1483 aaKnown RBP40.62■■■■■ 4.09
NIPA2-208ENST00000560205 WIZO95785 1651 aa40.27■■■■■ 4.04
NIPA2-208ENST00000560205 RSF1Q96T23 1441 aaPredicted RBP40.16■■■■■ 4.02
NIPA2-208ENST00000560205 ERCC6Q03468 1493 aa40.1■■■■■ 4.01
NIPA2-208ENST00000560205 NESP48681 1621 aa40.08■■■■■ 4.01
NIPA2-208ENST00000560205 LAMC3Q9Y6N6 1575 aa40.02■■■■■ 4
NIPA2-208ENST00000560205 CUX2O14529 1486 aa39.85■■■■□ 3.97
NIPA2-208ENST00000560205 TOP2AP11388 1531 aaKnown RBP39.84■■■■□ 3.97
NIPA2-208ENST00000560205 CADPSQ9ULU8 1353 aa39.83■■■■□ 3.97
NIPA2-208ENST00000560205 PDS5BQ9NTI5 1447 aa39.77■■■■□ 3.96
NIPA2-208ENST00000560205 KIF21AQ7Z4S6 1674 aa39.62■■■■□ 3.93
NIPA2-208ENST00000560205 THOC2Q8NI27 1593 aaKnown RBP39.57■■■■□ 3.92
NIPA2-208ENST00000560205 CFTRP13569 1480 aa39.5■■■■□ 3.91
NIPA2-208ENST00000560205 CCDC88BA6NC98 1476 aa39.37■■■■□ 3.89
NIPA2-208ENST00000560205 FANCD2Q9BXW9 1451 aa39.34■■■■□ 3.89
NIPA2-208ENST00000560205 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
NIPA2-208ENST00000560205 CEP164Q9UPV0 1460 aa39.33■■■■□ 3.89
NIPA2-208ENST00000560205 WDR62O43379 1518 aa39.22■■■■□ 3.87
NIPA2-208ENST00000560205 PRDM2Q13029 1718 aa39.19■■■■□ 3.86
NIPA2-208ENST00000560205 DNAJC5Q9H3Z4 198 aa39.04■■■■□ 3.84
NIPA2-208ENST00000560205 URB2Q14146 1524 aaKnown RBP38.94■■■■□ 3.82
NIPA2-208ENST00000560205 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
NIPA2-208ENST00000560205 ABCC8Q09428 1581 aa38.73■■■■□ 3.79
NIPA2-208ENST00000560205 TOPBP1Q92547 1522 aa38.67■■■■□ 3.78
NIPA2-208ENST00000560205 DNMBPQ6XZF7 1577 aa38.6■■■■□ 3.77
NIPA2-208ENST00000560205 IFT140Q96RY7 1462 aa38.54■■■■□ 3.76
NIPA2-208ENST00000560205 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
NIPA2-208ENST00000560205 POLA1P09884 1462 aaPredicted RBP38.31■■■■□ 3.72
NIPA2-208ENST00000560205 TARBP1Q13395 1621 aaKnown RBP38.27■■■■□ 3.72
NIPA2-208ENST00000560205 CUX1P39880 1505 aa38.22■■■■□ 3.71
NIPA2-208ENST00000560205 SOGA1O94964 1423 aa38.18■■■■□ 3.7
NIPA2-208ENST00000560205 EIF4G3O43432 1585 aaKnown RBP38.18■■■■□ 3.7
NIPA2-208ENST00000560205 OSCARQ8IYS5 282 aa38.16■■■■□ 3.7
NIPA2-208ENST00000560205 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
NIPA2-208ENST00000560205 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
NIPA2-208ENST00000560205 AQRO60306 1485 aaKnown RBP eCLIP38.09■■■■□ 3.69
NIPA2-208ENST00000560205 WDR97A6NE52 1622 aa38.02■■■■□ 3.68
NIPA2-208ENST00000560205 TDRD9Q8NDG6 1382 aaKnown RBP37.97■■■■□ 3.67
NIPA2-208ENST00000560205 WRNQ14191 1432 aaPredicted RBP eCLIP37.88■■■■□ 3.66
NIPA2-208ENST00000560205 TOP2BQ02880 1626 aa37.84■■■■□ 3.65
NIPA2-208ENST00000560205 BIVM-ERCC5R4GMW8 1640 aa37.83■■■■□ 3.65
NIPA2-208ENST00000560205 ABCA10Q8WWZ4 1543 aa37.81■■■■□ 3.64
NIPA2-208ENST00000560205 GRIN2BQ13224 1484 aa37.77■■■■□ 3.64
NIPA2-208ENST00000560205 CHD1O14646 1710 aa37.77■■■■□ 3.64
NIPA2-208ENST00000560205 SYNJ1O43426 1573 aa37.76■■■■□ 3.63
NIPA2-208ENST00000560205 FBLN2P98095 1184 aa37.73■■■■□ 3.63
NIPA2-208ENST00000560205 GAPVD1Q14C86 1478 aa37.72■■■■□ 3.63
NIPA2-208ENST00000560205 SNAPC4Q5SXM2 1469 aa37.72■■■■□ 3.63
NIPA2-208ENST00000560205 MAGI1Q96QZ7 1491 aaPredicted RBP37.72■■■■□ 3.63
NIPA2-208ENST00000560205 ABCA5Q8WWZ7 1642 aa37.66■■■■□ 3.62
NIPA2-208ENST00000560205 PBRM1Q86U86 1689 aa37.64■■■■□ 3.62
NIPA2-208ENST00000560205 CHMP7Q8WUX9 453 aaPredicted RBP37.61■■■■□ 3.61
NIPA2-208ENST00000560205 SYNJ2O15056 1496 aa37.57■■■■□ 3.6
NIPA2-208ENST00000560205 TRIM41Q8WV44 630 aa37.53■■■■□ 3.6
NIPA2-208ENST00000560205 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
NIPA2-208ENST00000560205 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
NIPA2-208ENST00000560205 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
NIPA2-208ENST00000560205 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
NIPA2-208ENST00000560205 ERICH3Q5RHP9 1530 aa37.36■■■■□ 3.57
NIPA2-208ENST00000560205 CLASP1Q7Z460 1538 aa37.36■■■■□ 3.57
NIPA2-208ENST00000560205 ADAMTS12P58397 1594 aa37.31■■■■□ 3.56
NIPA2-208ENST00000560205 FHAD1B1AJZ9 1412 aa37.29■■■■□ 3.56
NIPA2-208ENST00000560205 GRIN2AQ12879 1464 aa37.27■■■■□ 3.56
NIPA2-208ENST00000560205 CYB5RLQ6IPT4 315 aa37.17■■■■□ 3.54
NIPA2-208ENST00000560205 KIF27Q86VH2 1401 aa37.14■■■■□ 3.54
NIPA2-208ENST00000560205 NUP160Q12769 1436 aa37.12■■■■□ 3.53
NIPA2-208ENST00000560205 ARAP1Q96P48 1450 aa37.12■■■■□ 3.53
NIPA2-208ENST00000560205 CEP170Q5SW79 1584 aa37.07■■■■□ 3.52
NIPA2-208ENST00000560205 IGF1RP08069 1367 aa37.03■■■■□ 3.52
NIPA2-208ENST00000560205 CUL7Q14999 1698 aa36.95■■■■□ 3.51
NIPA2-208ENST00000560205 SHROOM2Q13796 1616 aa36.88■■■■□ 3.5
NIPA2-208ENST00000560205 CARMIL1Q5VZK9 1371 aa36.8■■■■□ 3.48
NIPA2-208ENST00000560205 JPH4Q96JJ6 628 aa36.78■■■■□ 3.48
NIPA2-208ENST00000560205 ERCC6L2Q5T890 1561 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms