RNA–Protein interactions for RNA: ENST00000560110.1

PATL2-206, Transcript of PAT1 homolog 2, humanhuman

TSL 5

Gene PATL2, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL2-206ENST00000560110 NISCHQ9Y2I1 1504 aa33.45■■■□□ 2.95
PATL2-206ENST00000560110 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
PATL2-206ENST00000560110 ABCC9O60706 1549 aa29.35■■■□□ 2.29
PATL2-206ENST00000560110 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
PATL2-206ENST00000560110 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
PATL2-206ENST00000560110 NACADO15069 1562 aa28.07■■■□□ 2.08
PATL2-206ENST00000560110 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
PATL2-206ENST00000560110 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
PATL2-206ENST00000560110 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
PATL2-206ENST00000560110 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
PATL2-206ENST00000560110 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
PATL2-206ENST00000560110 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
PATL2-206ENST00000560110 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
PATL2-206ENST00000560110 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
PATL2-206ENST00000560110 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
PATL2-206ENST00000560110 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
PATL2-206ENST00000560110 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
PATL2-206ENST00000560110 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
PATL2-206ENST00000560110 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
PATL2-206ENST00000560110 BAZ1AQ9NRL2 1556 aaPredicted RBP25.94■■□□□ 1.74
PATL2-206ENST00000560110 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PATL2-206ENST00000560110 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
PATL2-206ENST00000560110 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
PATL2-206ENST00000560110 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
PATL2-206ENST00000560110 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
PATL2-206ENST00000560110 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
PATL2-206ENST00000560110 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
PATL2-206ENST00000560110 WIZO95785 1651 aa25.49■■□□□ 1.67
PATL2-206ENST00000560110 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
PATL2-206ENST00000560110 NESP48681 1621 aa25.34■■□□□ 1.65
PATL2-206ENST00000560110 ERCC6Q03468 1493 aa25.32■■□□□ 1.64
PATL2-206ENST00000560110 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
PATL2-206ENST00000560110 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
PATL2-206ENST00000560110 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
PATL2-206ENST00000560110 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
PATL2-206ENST00000560110 CUX2O14529 1486 aa25.09■■□□□ 1.61
PATL2-206ENST00000560110 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
PATL2-206ENST00000560110 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
PATL2-206ENST00000560110 CFTRP13569 1480 aa24.96■■□□□ 1.59
PATL2-206ENST00000560110 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
PATL2-206ENST00000560110 FANCD2Q9BXW9 1451 aa24.86■■□□□ 1.57
PATL2-206ENST00000560110 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
PATL2-206ENST00000560110 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
PATL2-206ENST00000560110 WDR62O43379 1518 aa24.75■■□□□ 1.55
PATL2-206ENST00000560110 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
PATL2-206ENST00000560110 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
PATL2-206ENST00000560110 URB2Q14146 1524 aaKnown RBP24.62■■□□□ 1.53
PATL2-206ENST00000560110 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
PATL2-206ENST00000560110 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
PATL2-206ENST00000560110 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
PATL2-206ENST00000560110 DNMBPQ6XZF7 1577 aa24.39■■□□□ 1.5
PATL2-206ENST00000560110 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
PATL2-206ENST00000560110 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
PATL2-206ENST00000560110 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
PATL2-206ENST00000560110 CUX1P39880 1505 aa24.19■■□□□ 1.46
PATL2-206ENST00000560110 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
PATL2-206ENST00000560110 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
PATL2-206ENST00000560110 SOGA1O94964 1423 aa24.14■■□□□ 1.45
PATL2-206ENST00000560110 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
PATL2-206ENST00000560110 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
PATL2-206ENST00000560110 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
PATL2-206ENST00000560110 OSCARQ8IYS5 282 aa24.08■■□□□ 1.45
PATL2-206ENST00000560110 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
PATL2-206ENST00000560110 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
PATL2-206ENST00000560110 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
PATL2-206ENST00000560110 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
PATL2-206ENST00000560110 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
PATL2-206ENST00000560110 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
PATL2-206ENST00000560110 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
PATL2-206ENST00000560110 FBLN2P98095 1184 aa23.87■■□□□ 1.41
PATL2-206ENST00000560110 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
PATL2-206ENST00000560110 CHD1O14646 1710 aa23.86■■□□□ 1.41
PATL2-206ENST00000560110 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
PATL2-206ENST00000560110 SNAPC4Q5SXM2 1469 aa23.85■■□□□ 1.41
PATL2-206ENST00000560110 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
PATL2-206ENST00000560110 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
PATL2-206ENST00000560110 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
PATL2-206ENST00000560110 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
PATL2-206ENST00000560110 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
PATL2-206ENST00000560110 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
PATL2-206ENST00000560110 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
PATL2-206ENST00000560110 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
PATL2-206ENST00000560110 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
PATL2-206ENST00000560110 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
PATL2-206ENST00000560110 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
PATL2-206ENST00000560110 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
PATL2-206ENST00000560110 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
PATL2-206ENST00000560110 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
PATL2-206ENST00000560110 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
PATL2-206ENST00000560110 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
PATL2-206ENST00000560110 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
PATL2-206ENST00000560110 NUP160Q12769 1436 aa23.46■■□□□ 1.35
PATL2-206ENST00000560110 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
PATL2-206ENST00000560110 IGF1RP08069 1367 aa23.43■■□□□ 1.34
PATL2-206ENST00000560110 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
PATL2-206ENST00000560110 CUL7Q14999 1698 aa23.35■■□□□ 1.33
PATL2-206ENST00000560110 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
PATL2-206ENST00000560110 SHROOM2Q13796 1616 aa23.28■■□□□ 1.32
PATL2-206ENST00000560110 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
PATL2-206ENST00000560110 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms