RNA–Protein interactions for RNA: ENST00000560052.1

LARP6-205, Transcript of La ribonucleoprotein domain family member 6, humanhuman

TSL 2

Gene LARP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-205ENST00000560052 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
LARP6-205ENST00000560052 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
LARP6-205ENST00000560052 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
LARP6-205ENST00000560052 ABCC9O60706 1549 aa23.24■■□□□ 1.31
LARP6-205ENST00000560052 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
LARP6-205ENST00000560052 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
LARP6-205ENST00000560052 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
LARP6-205ENST00000560052 NACADO15069 1562 aa22.22■■□□□ 1.15
LARP6-205ENST00000560052 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
LARP6-205ENST00000560052 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
LARP6-205ENST00000560052 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
LARP6-205ENST00000560052 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
LARP6-205ENST00000560052 UNC13AQ9UPW8 1703 aa21.7■■□□□ 1.06
LARP6-205ENST00000560052 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
LARP6-205ENST00000560052 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
LARP6-205ENST00000560052 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
LARP6-205ENST00000560052 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
LARP6-205ENST00000560052 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
LARP6-205ENST00000560052 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
LARP6-205ENST00000560052 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
LARP6-205ENST00000560052 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
LARP6-205ENST00000560052 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
LARP6-205ENST00000560052 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
LARP6-205ENST00000560052 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
LARP6-205ENST00000560052 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
LARP6-205ENST00000560052 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
LARP6-205ENST00000560052 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
LARP6-205ENST00000560052 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
LARP6-205ENST00000560052 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
LARP6-205ENST00000560052 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
LARP6-205ENST00000560052 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
LARP6-205ENST00000560052 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
LARP6-205ENST00000560052 WIZO95785 1651 aa20.28■□□□□ 0.84
LARP6-205ENST00000560052 NESP48681 1621 aa20.09■□□□□ 0.81
LARP6-205ENST00000560052 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
LARP6-205ENST00000560052 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
LARP6-205ENST00000560052 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
LARP6-205ENST00000560052 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
LARP6-205ENST00000560052 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
LARP6-205ENST00000560052 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
LARP6-205ENST00000560052 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
LARP6-205ENST00000560052 CFTRP13569 1480 aa19.85■□□□□ 0.77
LARP6-205ENST00000560052 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
LARP6-205ENST00000560052 CUX2O14529 1486 aa19.74■□□□□ 0.75
LARP6-205ENST00000560052 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
LARP6-205ENST00000560052 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
LARP6-205ENST00000560052 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
LARP6-205ENST00000560052 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
LARP6-205ENST00000560052 FOXD1Q16676 465 aa19.6■□□□□ 0.73
LARP6-205ENST00000560052 WDR62O43379 1518 aa19.56■□□□□ 0.72
LARP6-205ENST00000560052 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
LARP6-205ENST00000560052 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
LARP6-205ENST00000560052 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
LARP6-205ENST00000560052 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
LARP6-205ENST00000560052 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
LARP6-205ENST00000560052 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
LARP6-205ENST00000560052 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
LARP6-205ENST00000560052 CUX1P39880 1505 aa19.26■□□□□ 0.67
LARP6-205ENST00000560052 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
LARP6-205ENST00000560052 SOGA1O94964 1423 aa19.25■□□□□ 0.67
LARP6-205ENST00000560052 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
LARP6-205ENST00000560052 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
LARP6-205ENST00000560052 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
LARP6-205ENST00000560052 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
LARP6-205ENST00000560052 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
LARP6-205ENST00000560052 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
LARP6-205ENST00000560052 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
LARP6-205ENST00000560052 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
LARP6-205ENST00000560052 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
LARP6-205ENST00000560052 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
LARP6-205ENST00000560052 FBLN2P98095 1184 aa19.05■□□□□ 0.64
LARP6-205ENST00000560052 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
LARP6-205ENST00000560052 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
LARP6-205ENST00000560052 BIVM-ERCC5R4GMW8 1640 aa19■□□□□ 0.63
LARP6-205ENST00000560052 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
LARP6-205ENST00000560052 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
LARP6-205ENST00000560052 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
LARP6-205ENST00000560052 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
LARP6-205ENST00000560052 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
LARP6-205ENST00000560052 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
LARP6-205ENST00000560052 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
LARP6-205ENST00000560052 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
LARP6-205ENST00000560052 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
LARP6-205ENST00000560052 CHD1O14646 1710 aa18.82■□□□□ 0.6
LARP6-205ENST00000560052 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
LARP6-205ENST00000560052 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
LARP6-205ENST00000560052 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
LARP6-205ENST00000560052 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
LARP6-205ENST00000560052 IGF1RP08069 1367 aa18.77■□□□□ 0.6
LARP6-205ENST00000560052 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
LARP6-205ENST00000560052 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
LARP6-205ENST00000560052 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
LARP6-205ENST00000560052 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
LARP6-205ENST00000560052 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
LARP6-205ENST00000560052 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
LARP6-205ENST00000560052 MSH5O43196 834 aa18.66■□□□□ 0.58
LARP6-205ENST00000560052 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
LARP6-205ENST00000560052 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
LARP6-205ENST00000560052 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
LARP6-205ENST00000560052 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms