RNA–Protein interactions for RNA: ENST00000560017.1

NTRK3-217, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5

Gene NTRK3, Length 257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-217ENST00000560017 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
NTRK3-217ENST00000560017 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
NTRK3-217ENST00000560017 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
NTRK3-217ENST00000560017 ABCC9O60706 1549 aa15.39■□□□□ 0.05
NTRK3-217ENST00000560017 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.05
NTRK3-217ENST00000560017 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
NTRK3-217ENST00000560017 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.03
NTRK3-217ENST00000560017 NACADO15069 1562 aa15.14■□□□□ 0.01
NTRK3-217ENST00000560017 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
NTRK3-217ENST00000560017 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
NTRK3-217ENST00000560017 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
NTRK3-217ENST00000560017 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
NTRK3-217ENST00000560017 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
NTRK3-217ENST00000560017 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
NTRK3-217ENST00000560017 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
NTRK3-217ENST00000560017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
NTRK3-217ENST00000560017 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
NTRK3-217ENST00000560017 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
NTRK3-217ENST00000560017 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
NTRK3-217ENST00000560017 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
NTRK3-217ENST00000560017 WIZO95785 1651 aa14.16□□□□□ -0.14
NTRK3-217ENST00000560017 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
NTRK3-217ENST00000560017 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
NTRK3-217ENST00000560017 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
NTRK3-217ENST00000560017 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
NTRK3-217ENST00000560017 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
NTRK3-217ENST00000560017 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
NTRK3-217ENST00000560017 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
NTRK3-217ENST00000560017 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
NTRK3-217ENST00000560017 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
NTRK3-217ENST00000560017 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
NTRK3-217ENST00000560017 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
NTRK3-217ENST00000560017 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
NTRK3-217ENST00000560017 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
NTRK3-217ENST00000560017 CFTRP13569 1480 aa13.6□□□□□ -0.23
NTRK3-217ENST00000560017 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
NTRK3-217ENST00000560017 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
NTRK3-217ENST00000560017 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
NTRK3-217ENST00000560017 NESP48681 1621 aa13.48□□□□□ -0.25
NTRK3-217ENST00000560017 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
NTRK3-217ENST00000560017 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
NTRK3-217ENST00000560017 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
NTRK3-217ENST00000560017 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
NTRK3-217ENST00000560017 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
NTRK3-217ENST00000560017 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
NTRK3-217ENST00000560017 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
NTRK3-217ENST00000560017 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
NTRK3-217ENST00000560017 CUX1P39880 1505 aa13.36□□□□□ -0.27
NTRK3-217ENST00000560017 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
NTRK3-217ENST00000560017 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
NTRK3-217ENST00000560017 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
NTRK3-217ENST00000560017 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
NTRK3-217ENST00000560017 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
NTRK3-217ENST00000560017 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
NTRK3-217ENST00000560017 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
NTRK3-217ENST00000560017 SOGA1O94964 1423 aa13.2□□□□□ -0.3
NTRK3-217ENST00000560017 EEA1Q15075 1411 aa13.2□□□□□ -0.3
NTRK3-217ENST00000560017 WDR62O43379 1518 aa13.18□□□□□ -0.3
NTRK3-217ENST00000560017 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
NTRK3-217ENST00000560017 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
NTRK3-217ENST00000560017 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
NTRK3-217ENST00000560017 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
NTRK3-217ENST00000560017 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
NTRK3-217ENST00000560017 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
NTRK3-217ENST00000560017 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
NTRK3-217ENST00000560017 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
NTRK3-217ENST00000560017 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
NTRK3-217ENST00000560017 CUX2O14529 1486 aa13.1□□□□□ -0.31
NTRK3-217ENST00000560017 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
NTRK3-217ENST00000560017 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
NTRK3-217ENST00000560017 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
NTRK3-217ENST00000560017 KIF21BO75037 1637 aa13.05□□□□□ -0.32
NTRK3-217ENST00000560017 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
NTRK3-217ENST00000560017 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
NTRK3-217ENST00000560017 IGF1RP08069 1367 aa13□□□□□ -0.33
NTRK3-217ENST00000560017 GOLGA3Q08378 1498 aa12.99□□□□□ -0.33
NTRK3-217ENST00000560017 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
NTRK3-217ENST00000560017 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
NTRK3-217ENST00000560017 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
NTRK3-217ENST00000560017 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
NTRK3-217ENST00000560017 CUL7Q14999 1698 aa12.97□□□□□ -0.33
NTRK3-217ENST00000560017 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
NTRK3-217ENST00000560017 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
NTRK3-217ENST00000560017 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
NTRK3-217ENST00000560017 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
NTRK3-217ENST00000560017 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
NTRK3-217ENST00000560017 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
NTRK3-217ENST00000560017 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
NTRK3-217ENST00000560017 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
NTRK3-217ENST00000560017 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
NTRK3-217ENST00000560017 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
NTRK3-217ENST00000560017 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
NTRK3-217ENST00000560017 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
NTRK3-217ENST00000560017 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
NTRK3-217ENST00000560017 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
NTRK3-217ENST00000560017 CTTNBP2Q8WZ74 1663 aa12.82□□□□□ -0.36
NTRK3-217ENST00000560017 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
NTRK3-217ENST00000560017 CLIP1P30622 1438 aa12.76□□□□□ -0.37
NTRK3-217ENST00000560017 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
NTRK3-217ENST00000560017 CHD1O14646 1710 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms