RNA–Protein interactions for RNA: ENST00000559972.1

MEIS2-216, Transcript of Meis homeobox 2, humanhuman

TSL 2

Gene MEIS2, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-216ENST00000559972 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
MEIS2-216ENST00000559972 ABCC9O60706 1549 aa27.11■■□□□ 1.93
MEIS2-216ENST00000559972 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
MEIS2-216ENST00000559972 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
MEIS2-216ENST00000559972 NACADO15069 1562 aa25.61■■□□□ 1.69
MEIS2-216ENST00000559972 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
MEIS2-216ENST00000559972 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
MEIS2-216ENST00000559972 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
MEIS2-216ENST00000559972 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
MEIS2-216ENST00000559972 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
MEIS2-216ENST00000559972 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
MEIS2-216ENST00000559972 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
MEIS2-216ENST00000559972 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
MEIS2-216ENST00000559972 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
MEIS2-216ENST00000559972 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
MEIS2-216ENST00000559972 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
MEIS2-216ENST00000559972 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
MEIS2-216ENST00000559972 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
MEIS2-216ENST00000559972 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
MEIS2-216ENST00000559972 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
MEIS2-216ENST00000559972 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
MEIS2-216ENST00000559972 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
MEIS2-216ENST00000559972 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
MEIS2-216ENST00000559972 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
MEIS2-216ENST00000559972 CUX2O14529 1486 aa23.43■■□□□ 1.34
MEIS2-216ENST00000559972 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
MEIS2-216ENST00000559972 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
MEIS2-216ENST00000559972 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
MEIS2-216ENST00000559972 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
MEIS2-216ENST00000559972 NESP48681 1621 aa23.27■■□□□ 1.32
MEIS2-216ENST00000559972 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
MEIS2-216ENST00000559972 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
MEIS2-216ENST00000559972 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
MEIS2-216ENST00000559972 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
MEIS2-216ENST00000559972 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
MEIS2-216ENST00000559972 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
MEIS2-216ENST00000559972 WIZO95785 1651 aa22.9■■□□□ 1.26
MEIS2-216ENST00000559972 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
MEIS2-216ENST00000559972 WDR62O43379 1518 aa22.73■■□□□ 1.23
MEIS2-216ENST00000559972 RSF1Q96T23 1441 aaPredicted RBP22.68■■□□□ 1.22
MEIS2-216ENST00000559972 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
MEIS2-216ENST00000559972 CFTRP13569 1480 aa22.64■■□□□ 1.21
MEIS2-216ENST00000559972 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.21
MEIS2-216ENST00000559972 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
MEIS2-216ENST00000559972 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
MEIS2-216ENST00000559972 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
MEIS2-216ENST00000559972 PRDM2Q13029 1718 aa22.39■■□□□ 1.17
MEIS2-216ENST00000559972 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
MEIS2-216ENST00000559972 OSCARQ8IYS5 282 aa22.36■■□□□ 1.17
MEIS2-216ENST00000559972 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
MEIS2-216ENST00000559972 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
MEIS2-216ENST00000559972 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
MEIS2-216ENST00000559972 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
MEIS2-216ENST00000559972 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
MEIS2-216ENST00000559972 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
MEIS2-216ENST00000559972 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
MEIS2-216ENST00000559972 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
MEIS2-216ENST00000559972 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
MEIS2-216ENST00000559972 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
MEIS2-216ENST00000559972 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.117e-8■■■■■ 27.4
MEIS2-216ENST00000559972 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
MEIS2-216ENST00000559972 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
MEIS2-216ENST00000559972 CHD1O14646 1710 aa21.92■■□□□ 1.1
MEIS2-216ENST00000559972 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
MEIS2-216ENST00000559972 SOGA1O94964 1423 aa21.89■■□□□ 1.09
MEIS2-216ENST00000559972 FBLN2P98095 1184 aa21.84■■□□□ 1.09
MEIS2-216ENST00000559972 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
MEIS2-216ENST00000559972 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
MEIS2-216ENST00000559972 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
MEIS2-216ENST00000559972 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
MEIS2-216ENST00000559972 CUX1P39880 1505 aa21.78■■□□□ 1.08
MEIS2-216ENST00000559972 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
MEIS2-216ENST00000559972 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
MEIS2-216ENST00000559972 MAGI1Q96QZ7 1491 aaPredicted RBP21.7■■□□□ 1.06
MEIS2-216ENST00000559972 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
MEIS2-216ENST00000559972 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
MEIS2-216ENST00000559972 CLASP1Q7Z460 1538 aa21.67■■□□□ 1.06
MEIS2-216ENST00000559972 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
MEIS2-216ENST00000559972 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
MEIS2-216ENST00000559972 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
MEIS2-216ENST00000559972 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
MEIS2-216ENST00000559972 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
MEIS2-216ENST00000559972 PBRM1Q86U86 1689 aa21.59■■□□□ 1.05
MEIS2-216ENST00000559972 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
MEIS2-216ENST00000559972 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
MEIS2-216ENST00000559972 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
MEIS2-216ENST00000559972 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
MEIS2-216ENST00000559972 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
MEIS2-216ENST00000559972 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
MEIS2-216ENST00000559972 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
MEIS2-216ENST00000559972 NUP160Q12769 1436 aa21.36■■□□□ 1.01
MEIS2-216ENST00000559972 CEP170Q5SW79 1584 aa21.33■■□□□ 1.01
MEIS2-216ENST00000559972 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
MEIS2-216ENST00000559972 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
MEIS2-216ENST00000559972 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
MEIS2-216ENST00000559972 SHROOM2Q13796 1616 aa21.27■■□□□ 1
MEIS2-216ENST00000559972 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
MEIS2-216ENST00000559972 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
MEIS2-216ENST00000559972 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
MEIS2-216ENST00000559972 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms