RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
IDH3A-217ENST00000559889 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
IDH3A-217ENST00000559889 ABCC9O60706 1549 aa19.89■□□□□ 0.77
IDH3A-217ENST00000559889 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
IDH3A-217ENST00000559889 NACADO15069 1562 aa18.91■□□□□ 0.62
IDH3A-217ENST00000559889 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
IDH3A-217ENST00000559889 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
IDH3A-217ENST00000559889 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
IDH3A-217ENST00000559889 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
IDH3A-217ENST00000559889 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
IDH3A-217ENST00000559889 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
IDH3A-217ENST00000559889 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
IDH3A-217ENST00000559889 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
IDH3A-217ENST00000559889 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
IDH3A-217ENST00000559889 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
IDH3A-217ENST00000559889 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
IDH3A-217ENST00000559889 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
IDH3A-217ENST00000559889 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
IDH3A-217ENST00000559889 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
IDH3A-217ENST00000559889 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
IDH3A-217ENST00000559889 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.38
IDH3A-217ENST00000559889 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
IDH3A-217ENST00000559889 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
IDH3A-217ENST00000559889 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
IDH3A-217ENST00000559889 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
IDH3A-217ENST00000559889 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
IDH3A-217ENST00000559889 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
IDH3A-217ENST00000559889 NESP48681 1621 aa17.15■□□□□ 0.34
IDH3A-217ENST00000559889 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
IDH3A-217ENST00000559889 WIZO95785 1651 aa17.09■□□□□ 0.33
IDH3A-217ENST00000559889 CUX2O14529 1486 aa17.05■□□□□ 0.32
IDH3A-217ENST00000559889 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
IDH3A-217ENST00000559889 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
IDH3A-217ENST00000559889 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
IDH3A-217ENST00000559889 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
IDH3A-217ENST00000559889 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
IDH3A-217ENST00000559889 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
IDH3A-217ENST00000559889 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
IDH3A-217ENST00000559889 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
IDH3A-217ENST00000559889 CFTRP13569 1480 aa16.81■□□□□ 0.28
IDH3A-217ENST00000559889 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
IDH3A-217ENST00000559889 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
IDH3A-217ENST00000559889 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
IDH3A-217ENST00000559889 WDR62O43379 1518 aa16.74■□□□□ 0.27
IDH3A-217ENST00000559889 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
IDH3A-217ENST00000559889 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
IDH3A-217ENST00000559889 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
IDH3A-217ENST00000559889 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
IDH3A-217ENST00000559889 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
IDH3A-217ENST00000559889 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
IDH3A-217ENST00000559889 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
IDH3A-217ENST00000559889 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
IDH3A-217ENST00000559889 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
IDH3A-217ENST00000559889 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
IDH3A-217ENST00000559889 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
IDH3A-217ENST00000559889 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
IDH3A-217ENST00000559889 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
IDH3A-217ENST00000559889 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■■ 26.9
IDH3A-217ENST00000559889 CUX1P39880 1505 aa16.25■□□□□ 0.19
IDH3A-217ENST00000559889 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
IDH3A-217ENST00000559889 SOGA1O94964 1423 aa16.23■□□□□ 0.19
IDH3A-217ENST00000559889 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
IDH3A-217ENST00000559889 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
IDH3A-217ENST00000559889 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
IDH3A-217ENST00000559889 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
IDH3A-217ENST00000559889 CHD1O14646 1710 aa16.09■□□□□ 0.17
IDH3A-217ENST00000559889 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
IDH3A-217ENST00000559889 FBLN2P98095 1184 aa16.08■□□□□ 0.16
IDH3A-217ENST00000559889 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
IDH3A-217ENST00000559889 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
IDH3A-217ENST00000559889 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
IDH3A-217ENST00000559889 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
IDH3A-217ENST00000559889 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
IDH3A-217ENST00000559889 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
IDH3A-217ENST00000559889 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
IDH3A-217ENST00000559889 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
IDH3A-217ENST00000559889 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
IDH3A-217ENST00000559889 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
IDH3A-217ENST00000559889 SYNJ1O43426 1573 aa16.02■□□□□ 0.15
IDH3A-217ENST00000559889 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
IDH3A-217ENST00000559889 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
IDH3A-217ENST00000559889 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
IDH3A-217ENST00000559889 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
IDH3A-217ENST00000559889 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
IDH3A-217ENST00000559889 CLASP1Q7Z460 1538 aa15.96■□□□□ 0.15
IDH3A-217ENST00000559889 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
IDH3A-217ENST00000559889 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
IDH3A-217ENST00000559889 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
IDH3A-217ENST00000559889 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
IDH3A-217ENST00000559889 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
IDH3A-217ENST00000559889 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
IDH3A-217ENST00000559889 NUP160Q12769 1436 aa15.81■□□□□ 0.12
IDH3A-217ENST00000559889 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
IDH3A-217ENST00000559889 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
IDH3A-217ENST00000559889 IGF1RP08069 1367 aa15.72■□□□□ 0.11
IDH3A-217ENST00000559889 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
IDH3A-217ENST00000559889 SHROOM2Q13796 1616 aa15.71■□□□□ 0.1
IDH3A-217ENST00000559889 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
IDH3A-217ENST00000559889 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
IDH3A-217ENST00000559889 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms